RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 LPIN2Q92539 896 aa24.7■■□□□ 1.54
CMTM3-211ENST00000565922 CEP126Q9P2H0 1117 aa24.7■■□□□ 1.54
CMTM3-211ENST00000565922 MKRN1Q9UHC7 482 aaKnown RBP24.7■■□□□ 1.54
CMTM3-211ENST00000565922 RASSF10A6NK89 507 aa24.69■■□□□ 1.54
CMTM3-211ENST00000565922 CELF2O95319 508 aaKnown RBP24.69■■□□□ 1.54
CMTM3-211ENST00000565922 ATG9AQ7Z3C6 839 aa24.69■■□□□ 1.54
CMTM3-211ENST00000565922 FBXO33Q7Z6M2 555 aa24.69■■□□□ 1.54
CMTM3-211ENST00000565922 USP48Q86UV5 1035 aa24.69■■□□□ 1.54
CMTM3-211ENST00000565922 ITPRIPQ8IWB1 547 aa24.69■■□□□ 1.54
CMTM3-211ENST00000565922 FRAT2O75474 233 aaPredicted RBP24.68■■□□□ 1.54
CMTM3-211ENST00000565922 FGFR2P21802 821 aa24.68■■□□□ 1.54
CMTM3-211ENST00000565922 ANGEL2Q5VTE6 544 aaKnown RBP24.68■■□□□ 1.54
CMTM3-211ENST00000565922 FMR1Q06787 632 aaKnown RBP eCLIP24.67■■□□□ 1.54
CMTM3-211ENST00000565922 DEFB115Q30KQ5 88 aa24.67■■□□□ 1.54
CMTM3-211ENST00000565922 CST9Q5W186 159 aa24.67■■□□□ 1.54
CMTM3-211ENST00000565922 CERS5Q8N5B7 392 aa24.66■■□□□ 1.54
CMTM3-211ENST00000565922 ZNF408Q9H9D4 720 aa24.66■■□□□ 1.54
CMTM3-211ENST00000565922 PA2G4Q9UQ80 394 aaKnown RBP24.66■■□□□ 1.54
CMTM3-211ENST00000565922 TLL2Q9Y6L7 1015 aa24.66■■□□□ 1.54
CMTM3-211ENST00000565922 WNT10BO00744 389 aa24.65■■□□□ 1.54
CMTM3-211ENST00000565922 ATP2B3Q16720 1220 aa24.65■■□□□ 1.54
CMTM3-211ENST00000565922 MFSD14BQ5SR56 506 aa24.65■■□□□ 1.54
CMTM3-211ENST00000565922 TBC1D22AQ8WUA7 517 aa24.65■■□□□ 1.54
CMTM3-211ENST00000565922 RCAN3Q9UKA8 241 aa24.65■■□□□ 1.54
CMTM3-211ENST00000565922 ADM5C9JUS6 153 aa24.64■■□□□ 1.54
CMTM3-211ENST00000565922 DLGAP5Q15398 846 aa24.64■■□□□ 1.54
CMTM3-211ENST00000565922 NBPF9Q3BBW0 867 aa24.64■■□□□ 1.54
CMTM3-211ENST00000565922 JAG2Q9Y219 1238 aa24.64■■□□□ 1.54
CMTM3-211ENST00000565922 ASTN2O75129 1339 aaPredicted RBP24.63■■□□□ 1.53
CMTM3-211ENST00000565922 RLBP1P12271 317 aa24.63■■□□□ 1.53
CMTM3-211ENST00000565922 ECE1P42892 770 aa24.63■■□□□ 1.53
CMTM3-211ENST00000565922 MTMR14Q8NCE2 650 aa24.63■■□□□ 1.53
CMTM3-211ENST00000565922 HHIPL1Q96JK4 782 aa24.63■■□□□ 1.53
CMTM3-211ENST00000565922 F8W031 263 aaPredicted RBP24.62■■□□□ 1.53
CMTM3-211ENST00000565922 MYO1BO43795 1136 aa24.62■■□□□ 1.53
CMTM3-211ENST00000565922 BCAMP50895 628 aa24.62■■□□□ 1.53
CMTM3-211ENST00000565922 APOBEC3FQ8IUX4 373 aaKnown RBP24.62■■□□□ 1.53
CMTM3-211ENST00000565922 GNL3LQ9NVN8 582 aaKnown RBP24.62■■□□□ 1.53
CMTM3-211ENST00000565922 AKAP2Q9Y2D5 859 aa24.62■■□□□ 1.53
CMTM3-211ENST00000565922 VEGFBP49765 207 aa24.61■■□□□ 1.53
CMTM3-211ENST00000565922 PAXIP1Q6ZW49 1069 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-211ENST00000565922 SAPCD2Q86UD0 394 aa24.61■■□□□ 1.53
CMTM3-211ENST00000565922 C2orf69Q8N8R5 385 aa24.61■■□□□ 1.53
CMTM3-211ENST00000565922 ZBED3Q96IU2 234 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-211ENST00000565922 IQSEC3Q9UPP2 1182 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-211ENST00000565922 COL1A1P02452 1464 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-211ENST00000565922 THSD7BQ9C0I4 1608 aa24.61■■□□□ 1.53
CMTM3-211ENST00000565922 ZBTB7BO15156 539 aaPredicted RBP24.6■■□□□ 1.53
CMTM3-211ENST00000565922 CHAF1AQ13111 956 aaPredicted RBP24.6■■□□□ 1.53
CMTM3-211ENST00000565922 CDCA5Q96FF9 252 aa24.6■■□□□ 1.53
CMTM3-211ENST00000565922 GBA2Q9HCG7 927 aaPredicted RBP24.6■■□□□ 1.53
CMTM3-211ENST00000565922 TTF2Q9UNY4 1162 aaKnown RBP24.6■■□□□ 1.53
CMTM3-211ENST00000565922 PAPPA2Q9BXP8 1791 aa24.59■■□□□ 1.53
CMTM3-211ENST00000565922 PNMA6EA0A0J9YXQ4 647 aa24.59■■□□□ 1.53
CMTM3-211ENST00000565922 G3BP1Q13283 466 aaKnown RBP eCLIP24.59■■□□□ 1.53
CMTM3-211ENST00000565922 CFAP100Q494V2 611 aa24.59■■□□□ 1.53
CMTM3-211ENST00000565922 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.59■■□□□ 1.53
CMTM3-211ENST00000565922 SERPINA10Q9UK55 444 aa24.59■■□□□ 1.53
CMTM3-211ENST00000565922 SUGT1Q9Y2Z0 365 aa24.59■■□□□ 1.53
CMTM3-211ENST00000565922 WDR33Q9C0J8 1336 aaKnown RBP24.59■■□□□ 1.53
CMTM3-211ENST00000565922 RBM5P52756 815 aaKnown RBP eCLIP24.58■■□□□ 1.53
CMTM3-211ENST00000565922 WDR66Q8TBY9 1149 aa24.58■■□□□ 1.53
CMTM3-211ENST00000565922 PANK1Q8TE04 598 aa24.58■■□□□ 1.53
CMTM3-211ENST00000565922 CHMP4BQ9H444 224 aaKnown RBP24.58■■□□□ 1.53
CMTM3-211ENST00000565922 MAST3O60307 1309 aa24.58■■□□□ 1.52
CMTM3-211ENST00000565922 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 SEMA3EO15041 775 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 ATP8B2P98198 1209 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 SSH3Q8TE77 659 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 CAPNS2Q96L46 248 aa24.57■■□□□ 1.52
CMTM3-211ENST00000565922 ZBTB22O15209 634 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 NF2P35240 595 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 HUNKP57058 714 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 FKBP1BP68106 108 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 HDLBPQ00341 1268 aaKnown RBP24.56■■□□□ 1.52
CMTM3-211ENST00000565922 POLA2Q14181 598 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 C1orf115Q9H7X2 142 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 DDX19BQ9UMR2 479 aa24.56■■□□□ 1.52
CMTM3-211ENST00000565922 A0A1B0GUL7 405 aa24.55■■□□□ 1.52
CMTM3-211ENST00000565922 TFCP2Q12800 502 aa24.55■■□□□ 1.52
CMTM3-211ENST00000565922 MVPQ14764 893 aaKnown RBP24.55■■□□□ 1.52
CMTM3-211ENST00000565922 DLK2Q6UY11 383 aa24.55■■□□□ 1.52
CMTM3-211ENST00000565922 DENND2AQ9ULE3 1009 aa24.55■■□□□ 1.52
CMTM3-211ENST00000565922 CYP4F22Q6NT55 531 aa24.54■■□□□ 1.52
CMTM3-211ENST00000565922 PPP2R3BQ9Y5P8 575 aa24.54■■□□□ 1.52
CMTM3-211ENST00000565922 HSPA1AP0DMV8 641 aaKnown RBP24.53■■□□□ 1.52
CMTM3-211ENST00000565922 HSPA1BP0DMV9 641 aaKnown RBP24.53■■□□□ 1.52
CMTM3-211ENST00000565922 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
CMTM3-211ENST00000565922 PRMT6Q96LA8 375 aaPredicted RBP24.53■■□□□ 1.52
CMTM3-211ENST00000565922 CRKP46108 304 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 MAP2K1Q02750 393 aaPredicted RBP24.52■■□□□ 1.52
CMTM3-211ENST00000565922 GRM1Q13255 1194 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 TNFAIP1Q13829 316 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 CCDC102BQ68D86 513 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 ZGPATQ8N5A5 531 aaKnown RBP24.52■■□□□ 1.52
CMTM3-211ENST00000565922 TEKT1Q969V4 418 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 MRIQ9BWK5 157 aa24.52■■□□□ 1.52
CMTM3-211ENST00000565922 MAP2K2P36507 400 aa24.51■■□□□ 1.51
CMTM3-211ENST00000565922 PHKA1P46020 1223 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms