RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 USP17L3A6NCW0 530 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 USP17L4A6NCW7 530 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 VIL1P09327 827 aaKnown RBP27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 PHKA1P46020 1223 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 GMPSP49915 693 aaPredicted RBP27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 TNIP1Q15025 636 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 CAVIN4Q5BKX8 364 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 DACT2Q5SW24 774 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 USP17L1Q7RTZ2 530 aa27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 TLR7Q9NYK1 1049 aaKnown RBP27.47■■□□□ 1.99
SYNGR3-202ENST00000562045 COL1A1P02452 1464 aaPredicted RBP27.46■■□□□ 1.99
SYNGR3-202ENST00000562045 OTUD7AQ8TE49 926 aaPredicted RBP27.46■■□□□ 1.99
SYNGR3-202ENST00000562045 SCN4AP35499 1836 aa27.46■■□□□ 1.99
SYNGR3-202ENST00000562045 VPS37DQ86XT2 251 aa27.45■■□□□ 1.99
SYNGR3-202ENST00000562045 GPR108Q9NPR9 543 aa27.45■■□□□ 1.99
SYNGR3-202ENST00000562045 CCDC102BQ68D86 513 aa27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 TTLL5Q6EMB2 1281 aa27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 DBNDD2Q9BQY9 259 aa27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 SALL3Q9BXA9 1300 aa27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 EPS15P42566 896 aa27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 CCDC8Q9H0W5 538 aaPredicted RBP27.44■■□□□ 1.98
SYNGR3-202ENST00000562045 MX1P20591 662 aa27.43■■□□□ 1.98
SYNGR3-202ENST00000562045 STRIP1Q5VSL9 837 aa27.43■■□□□ 1.98
SYNGR3-202ENST00000562045 RSBN1LQ6PCB5 846 aaPredicted RBP27.43■■□□□ 1.98
SYNGR3-202ENST00000562045 CERS5Q8N5B7 392 aa27.43■■□□□ 1.98
SYNGR3-202ENST00000562045 OSBPL3Q9H4L5 887 aa27.43■■□□□ 1.98
SYNGR3-202ENST00000562045 KIF3CO14782 793 aa27.42■■□□□ 1.98
SYNGR3-202ENST00000562045 GMLQ99445 158 aa27.42■■□□□ 1.98
SYNGR3-202ENST00000562045 DBNLQ9UJU6 430 aaKnown RBP27.42■■□□□ 1.98
SYNGR3-202ENST00000562045 PDE1AP54750 535 aa27.41■■□□□ 1.98
SYNGR3-202ENST00000562045 GPRC5DQ9NZD1 345 aa27.41■■□□□ 1.98
SYNGR3-202ENST00000562045 IFIT2P09913 472 aaKnown RBP27.41■■□□□ 1.98
SYNGR3-202ENST00000562045 BMP2KLQ5H9B9 411 aa27.41■■□□□ 1.98
SYNGR3-202ENST00000562045 AACSQ86V21 672 aa27.41■■□□□ 1.98
SYNGR3-202ENST00000562045 CHAF1AQ13111 956 aaPredicted RBP27.4■■□□□ 1.98
SYNGR3-202ENST00000562045 STAP2Q9UGK3 403 aa27.4■■□□□ 1.98
SYNGR3-202ENST00000562045 FAM205AQ6ZU69 1335 aa27.4■■□□□ 1.98
SYNGR3-202ENST00000562045 VEGFAP15692 232 aaPredicted RBP27.39■■□□□ 1.98
SYNGR3-202ENST00000562045 AOX1Q06278 1338 aa27.39■■□□□ 1.98
SYNGR3-202ENST00000562045 GRIK5Q16478 980 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 CNOT7Q9UIV1 285 aaKnown RBP27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 FRAT2O75474 233 aaPredicted RBP27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 EGFRP00533 1210 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 POTEIP0CG38 1075 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 POTEJP0CG39 1038 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 RASGRF1Q13972 1273 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 SCARF1Q14162 830 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 TTC22Q5TAA0 569 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 MICALL2Q8IY33 904 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 GPATCH3Q96I76 525 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 HACL1Q9UJ83 578 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 AKAP11Q9UKA4 1901 aa27.38■■□□□ 1.97
SYNGR3-202ENST00000562045 PI16Q6UXB8 463 aa27.37■■□□□ 1.97
SYNGR3-202ENST00000562045 DPF2Q92785 391 aa27.37■■□□□ 1.97
SYNGR3-202ENST00000562045 GORABQ5T7V8 394 aa27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 AGBL3Q8NEM8 1001 aa27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 TTC41PQ6P2S7 1318 aa27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 RPS12P25398 132 aaKnown RBP27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 EPHX2P34913 555 aa27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 KIAA0825Q8IV33 1275 aa27.36■■□□□ 1.97
SYNGR3-202ENST00000562045 ADAMTSL1Q8N6G6 1762 aa27.35■■□□□ 1.97
SYNGR3-202ENST00000562045 LMOD1P29536 600 aaPredicted RBP27.35■■□□□ 1.97
SYNGR3-202ENST00000562045 MFSD14BQ5SR56 506 aa27.35■■□□□ 1.97
SYNGR3-202ENST00000562045 IQCA1LA6NCM1 817 aa27.34■■□□□ 1.97
SYNGR3-202ENST00000562045 ARID4AP29374 1257 aaPredicted RBP27.34■■□□□ 1.97
SYNGR3-202ENST00000562045 SAMD7Q7Z3H4 446 aa27.34■■□□□ 1.97
SYNGR3-202ENST00000562045 GNL3LQ9NVN8 582 aaKnown RBP27.34■■□□□ 1.97
SYNGR3-202ENST00000562045 F8W031 263 aaPredicted RBP27.33■■□□□ 1.97
SYNGR3-202ENST00000562045 GSPT1P15170 499 aaKnown RBP27.33■■□□□ 1.97
SYNGR3-202ENST00000562045 MCAMP43121 646 aa27.33■■□□□ 1.97
SYNGR3-202ENST00000562045 TRPM4Q8TD43 1214 aa27.33■■□□□ 1.97
SYNGR3-202ENST00000562045 ECHDC1Q9NTX5 307 aa27.33■■□□□ 1.97
SYNGR3-202ENST00000562045 HIRAP54198 1017 aaPredicted RBP27.33■■□□□ 1.96
SYNGR3-202ENST00000562045 TSHZ3Q63HK5 1081 aa27.33■■□□□ 1.96
SYNGR3-202ENST00000562045 HMG20BQ9P0W2 317 aa27.33■■□□□ 1.96
SYNGR3-202ENST00000562045 MYO3BQ8WXR4 1341 aa27.32■■□□□ 1.96
SYNGR3-202ENST00000562045 ERC2O15083 957 aa27.32■■□□□ 1.96
SYNGR3-202ENST00000562045 USP17L8P0C7I0 530 aa27.32■■□□□ 1.96
SYNGR3-202ENST00000562045 MYO5AQ9Y4I1 1855 aaKnown RBP27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 FKBP1AP62942 108 aaKnown RBP27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 C8orf34Q49A92 452 aa27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 TBC1D10BQ4KMP7 808 aaPredicted RBP27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 TTC39AQ5SRH9 613 aa27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 SNRKQ9NRH2 765 aa27.31■■□□□ 1.96
SYNGR3-202ENST00000562045 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 ZNF280AP59817 542 aaPredicted RBP27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 EAPPQ56P03 285 aaPredicted RBP27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 CCDC158Q5M9N0 1113 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 RBM26Q5T8P6 1007 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 PI4K2BQ8TCG2 481 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 BACH2Q9BYV9 841 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 ADARB2Q9NS39 739 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 DENND2AQ9ULE3 1009 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 PCDHAC2Q9Y5I4 1007 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 H7C1D1 291 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 ZBTB22O15209 634 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 GLRX3O76003 335 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 NDUFB9Q9Y6M9 179 aa27.3■■□□□ 1.96
SYNGR3-202ENST00000562045 SPATA5Q8NB90 893 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 329.1 ms