RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MEGF10Q96KG7 1140 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 ASB16Q96NS5 453 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 NACC1Q96RE7 527 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 RBCK1Q9BYM8 510 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 ADAM19Q9H013 955 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 SOX13Q9UN79 622 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 ZCCHC6Q5VYS8 1495 aaKnown RBP6.18□□□□□ -1.42
HERC1-215ENST00000561436 C9orf172C9J069 976 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 H3BRJ5 948 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 CPNE3O75131 537 aaKnown RBP6.18□□□□□ -1.42
HERC1-215ENST00000561436 TXNRD3Q86VQ6 643 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 TCF12Q99081 682 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 LIN7BQ9HAP6 207 aa6.18□□□□□ -1.42
HERC1-215ENST00000561436 ANKRD33BA6NCL7 494 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 SOX1O00570 391 aaPredicted RBP6.17□□□□□ -1.42
HERC1-215ENST00000561436 ITGB7P26010 798 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 CD68P34810 354 aaPredicted RBP6.17□□□□□ -1.42
HERC1-215ENST00000561436 RBM25P49756 843 aaKnown RBP6.17□□□□□ -1.42
HERC1-215ENST00000561436 FGD1P98174 961 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 IGF2-ASQ6U949 168 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 DNAJC14Q6Y2X3 702 aaPredicted RBP6.17□□□□□ -1.42
HERC1-215ENST00000561436 ACAD11Q709F0 780 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 BCL2L13Q9BXK5 485 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 EHD4Q9H223 541 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 WWC3Q9ULE0 1092 aa6.17□□□□□ -1.42
HERC1-215ENST00000561436 PNMA6FA0A0J9YX94 578 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 FAM177BA6PVY3 158 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 GADD45BO75293 160 aaPredicted RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 ITGAEP38570 1179 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 MAPK8P45983 427 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 IKBKEQ14164 716 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 COL19A1Q14993 1142 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 RSPO4Q2I0M5 234 aaPredicted RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 ZNF326Q5BKZ1 582 aaKnown RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 BSNDQ8WZ55 320 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 TP53INP1Q96A56 240 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 DMRTB1Q96MA1 342 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
HERC1-215ENST00000561436 SEMA6BQ9H3T3 888 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 CC2D2AQ9P2K1 1620 aa6.16□□□□□ -1.42
HERC1-215ENST00000561436 EIF4G1Q04637 1599 aaKnown RBP6.15□□□□□ -1.42
HERC1-215ENST00000561436 A0A096LPE4 126 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 A0A1W2PPZ6 126 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 K7ELQ4 463 aaPredicted RBP6.15□□□□□ -1.42
HERC1-215ENST00000561436 ADAM23O75077 832 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 NEFLP07196 543 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 GLB1P16278 677 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 ZNF157P51786 506 aaPredicted RBP6.15□□□□□ -1.42
HERC1-215ENST00000561436 CABP4P57796 275 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 DSC3Q14574 896 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 FAM117BQ6P1L5 589 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 USP26Q9BXU7 913 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 AKTIPQ9H8T0 292 aa6.15□□□□□ -1.42
HERC1-215ENST00000561436 E9PSI1 815 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 TREHO43280 583 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 DLGAP3O95886 979 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 ESRRAP11474 423 aaPredicted RBP6.14□□□□□ -1.43
HERC1-215ENST00000561436 GRM2Q14416 872 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 DUOXA2Q1HG44 320 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 ZNF423Q2M1K9 1284 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.14□□□□□ -1.43
HERC1-215ENST00000561436 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
HERC1-215ENST00000561436 MRPL18Q9H0U6 180 aaKnown RBP6.14□□□□□ -1.43
HERC1-215ENST00000561436 RNF19AQ9NV58 838 aa6.14□□□□□ -1.43
HERC1-215ENST00000561436 RBM47A0AV96 593 aaKnown RBP6.13□□□□□ -1.43
HERC1-215ENST00000561436 ECEL1O95672 775 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 CTSBP07858 339 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 PIP4K2BP78356 416 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 ATP2B2Q01814 1243 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 PLCB3Q01970 1234 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 GSTM4Q03013 218 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 PCDH1Q08174 1060 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 EAPPQ56P03 285 aaPredicted RBP6.13□□□□□ -1.43
HERC1-215ENST00000561436 NKAPLQ5M9Q1 402 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 CACTIN-AS1Q8N1I8 211 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 GIPC2Q8TF65 315 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 ALKBH8Q96BT7 664 aaKnown RBP6.13□□□□□ -1.43
HERC1-215ENST00000561436 UBL7Q96S82 380 aaPredicted RBP6.13□□□□□ -1.43
HERC1-215ENST00000561436 ABCB6Q9NP58 842 aa6.13□□□□□ -1.43
HERC1-215ENST00000561436 DYRK3O43781 588 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 P4HBP07237 508 aaKnown RBP6.12□□□□□ -1.43
HERC1-215ENST00000561436 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
HERC1-215ENST00000561436 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 MAP4K3Q8IVH8 894 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 KLHL23Q8NBE8 558 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 GLIS3Q8NEA6 775 aa6.12□□□□□ -1.43
HERC1-215ENST00000561436 CUX2O14529 1486 aa6.11□□□□□ -1.43
HERC1-215ENST00000561436 FCGRTP55899 365 aa6.11□□□□□ -1.43
HERC1-215ENST00000561436 FAAP100Q0VG06 881 aa6.11□□□□□ -1.43
HERC1-215ENST00000561436 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
HERC1-215ENST00000561436 NXPE4Q6UWF7 544 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms