RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 SECISBP2LQ93073 1101 aaKnown RBP3.43□□□□□ -1.86
RNF111-211ENST00000560952 CADPSQ9ULU8 1353 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 H3BRB1 525 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 J3QW42 95 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 PHACTR2O75167 634 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 IGHA2P01877 340 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 CDC27P30260 824 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 ATCAYQ86WG3 371 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 IL22RA1Q8N6P7 574 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 WNT8BQ93098 351 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 DNAJC2Q99543 621 aaKnown RBP3.42□□□□□ -1.86
RNF111-211ENST00000560952 PBX4Q9BYU1 374 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 TUT1Q9H6E5 874 aaKnown RBP3.42□□□□□ -1.86
RNF111-211ENST00000560952 PPME1Q9Y570 386 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 NCANO14594 1321 aa3.42□□□□□ -1.86
RNF111-211ENST00000560952 FZD6O60353 706 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 MCCP23508 829 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 CHRNA4P43681 627 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 ARL4DP49703 201 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 ADGRE1Q14246 886 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 CEP135Q66GS9 1140 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 GDF6Q6KF10 455 aaPredicted RBP3.41□□□□□ -1.86
RNF111-211ENST00000560952 TXNRD3Q86VQ6 643 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 GJD3Q8N144 294 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 GPATCH11Q8N954 259 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 MRPL18Q9H0U6 180 aaKnown RBP3.41□□□□□ -1.86
RNF111-211ENST00000560952 TMEM63CQ9P1W3 806 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 SALL4Q9UJQ4 1053 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 USP21Q9UK80 565 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 GNEQ9Y223 722 aaKnown RBP3.41□□□□□ -1.86
RNF111-211ENST00000560952 AMOTL2Q9Y2J4 779 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 TNFRSF21O75509 655 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 KCNA1Q09470 495 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 ZNF211Q13398 564 aaPredicted RBP3.41□□□□□ -1.86
RNF111-211ENST00000560952 EXOC8Q8IYI6 725 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 CEP120Q8N960 986 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 KLHL23Q8NBE8 558 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 DMRTB1Q96MA1 342 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 ADAM19Q9H013 955 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 GGNBP2Q9H3C7 697 aa3.41□□□□□ -1.86
RNF111-211ENST00000560952 LOC102724159A0A0B4J2E5 919 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 FAM229AH3BQW9 127 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 SMARCA5O60264 1052 aaPredicted RBP3.4□□□□□ -1.86
RNF111-211ENST00000560952 MTMR3Q13615 1198 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 PWP2Q15269 919 aaKnown RBP3.4□□□□□ -1.86
RNF111-211ENST00000560952 GRIK4Q16099 956 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 C1orf127Q8N9H9 656 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 TMEM102Q8N9M5 508 aaPredicted RBP3.4□□□□□ -1.86
RNF111-211ENST00000560952 IPO4Q8TEX9 1081 aaKnown RBP3.4□□□□□ -1.86
RNF111-211ENST00000560952 OSGEPQ9NPF4 335 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 KCNG1Q9UIX4 513 aa3.4□□□□□ -1.86
RNF111-211ENST00000560952 SERPINB4P48594 390 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 OS9Q13438 667 aaPredicted RBP3.4□□□□□ -1.87
RNF111-211ENST00000560952 FAM50AQ14320 339 aaKnown RBP3.4□□□□□ -1.87
RNF111-211ENST00000560952 MBTPS1Q14703 1052 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 HSP90AB4PQ58FF6 505 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 TMEM130Q8N3G9 435 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 DNAJC25Q9H1X3 360 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 RASSF4Q9H2L5 321 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 ANO2Q9NQ90 1003 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 CNTN3Q9P232 1028 aa3.4□□□□□ -1.87
RNF111-211ENST00000560952 CARNS1A5YM72 827 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 H3BRJ5 948 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 PDE2AO00408 941 aaPredicted RBP3.39□□□□□ -1.87
RNF111-211ENST00000560952 DLL1O00548 723 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 CYP2E1P05181 493 aaPredicted RBP3.39□□□□□ -1.87
RNF111-211ENST00000560952 SELPP16109 830 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 PIP4K2BP78356 416 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 NKAPLQ5M9Q1 402 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 COL13A1Q5TAT6 717 aaPredicted RBP3.39□□□□□ -1.87
RNF111-211ENST00000560952 NOL8Q76FK4 1167 aaKnown RBP3.39□□□□□ -1.87
RNF111-211ENST00000560952 RBCK1Q9BYM8 510 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 CHRDQ9H2X0 955 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 ZFYVE1Q9HBF4 777 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 ZFYVE28Q9HCC9 887 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 KANSL3Q9P2N6 904 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 TRIM33Q9UPN9 1127 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 RIPOR2Q9Y4F9 1068 aa3.39□□□□□ -1.87
RNF111-211ENST00000560952 PLEKHD1A6NEE1 506 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 SOWAHDA6NJG2 315 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 DYRK3O43781 588 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 PTMAP06454 111 aaKnown RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 NEFMP07197 916 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 H2AFB1P0C5Y9 115 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 H2AFB2P0C5Z0 115 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 TAL1P17542 331 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 ATP11AP98196 1134 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 HNRNPUQ00839 825 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNF111-211ENST00000560952 HP1BP3Q5SSJ5 553 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 SLC51AQ86UW1 340 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 DDX54Q8TDD1 881 aaKnown RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 TMC1Q8TDI8 760 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 FAM129BQ96TA1 746 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 OSMRQ99650 979 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 CEP41Q9BYV8 373 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 SEC31BQ9NQW1 1179 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 CCDC87Q9NVE4 849 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 DZANK1Q9NVP4 752 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 LAS1LQ9Y4W2 734 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms