RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 AKTIPQ9H8T0 292 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 TRAK1Q9UPV9 953 aa6.13□□□□□ -1.43
SPG11-206ENST00000558093 A0A096LPE4 126 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 GRIA4P48058 902 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 IREB2P48200 963 aaKnown RBP6.12□□□□□ -1.43
SPG11-206ENST00000558093 DSC3Q14574 896 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 SUZ12Q15022 739 aaKnown RBP6.12□□□□□ -1.43
SPG11-206ENST00000558093 VN1R5Q7Z5H4 357 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 HOMEZQ8IX15 550 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 EPS8L3Q8TE67 593 aaKnown RBP6.12□□□□□ -1.43
SPG11-206ENST00000558093 WFDC12Q8WWY7 111 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 KLHDC7BQ96G42 594 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 TCF12Q99081 682 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 USP26Q9BXU7 913 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 OSGEPQ9NPF4 335 aa6.12□□□□□ -1.43
SPG11-206ENST00000558093 GLB1P16278 677 aa6.11□□□□□ -1.43
SPG11-206ENST00000558093 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.433e-7■■■■□ 25.7
SPG11-206ENST00000558093 PCDH1Q08174 1060 aa6.11□□□□□ -1.43
SPG11-206ENST00000558093 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
SPG11-206ENST00000558093 SPRED3Q2MJR0 410 aa6.11□□□□□ -1.43
SPG11-206ENST00000558093 AGGF1Q8N302 714 aaeCLIP6.11□□□□□ -1.43
SPG11-206ENST00000558093 CLEC4MQ9H2X3 399 aaPredicted RBP6.11□□□□□ -1.43
SPG11-206ENST00000558093 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
SPG11-206ENST00000558093 F8W735 103 aaPredicted RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 DDX3YO15523 660 aaKnown RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 ALX3O95076 343 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 FURINP09958 794 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 NOS3P29474 1203 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 GSTM4Q03013 218 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 GRM2Q14416 872 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 PI16Q6UXB8 463 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 FBF1Q8TES7 1133 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 FOXD4L4Q8WXT5 416 aaPredicted RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 TP53INP1Q96A56 240 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 GZF1Q9H116 711 aaPredicted RBP6.1□□□□□ -1.43
SPG11-206ENST00000558093 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
SPG11-206ENST00000558093 SOX1O00570 391 aaPredicted RBP6.09□□□□□ -1.43
SPG11-206ENST00000558093 EIF4EBP3O60516 100 aaPredicted RBP6.09□□□□□ -1.43
SPG11-206ENST00000558093 WISP1O95388 367 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
SPG11-206ENST00000558093 HGSNATQ68CP4 663 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 PRPF40BQ6NWY9 871 aaKnown RBP6.09□□□□□ -1.43
SPG11-206ENST00000558093 DTHD1Q6ZMT9 781 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 TMEM130Q8N3G9 435 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 DDX54Q8TDD1 881 aaKnown RBP6.09□□□□□ -1.43
SPG11-206ENST00000558093 BCO2Q9BYV7 579 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 ABCB6Q9NP58 842 aa6.09□□□□□ -1.43
SPG11-206ENST00000558093 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 ZBTB7CA1YPR0 619 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 K7ELQ4 463 aaPredicted RBP6.08□□□□□ -1.44
SPG11-206ENST00000558093 ADAM11O75078 769 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 P4HBP07237 508 aaKnown RBP6.08□□□□□ -1.44
SPG11-206ENST00000558093 FCGRTP55899 365 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 MEGF10Q96KG7 1140 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 RUSC1Q9BVN2 902 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 CEP41Q9BYV8 373 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 ZNF576Q9H609 170 aa6.08□□□□□ -1.44
SPG11-206ENST00000558093 SOX17Q9H6I2 414 aaPredicted RBP6.08□□□□□ -1.44
SPG11-206ENST00000558093 ANKRD33BA6NCL7 494 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 LDHBP07195 334 aaKnown RBP6.07□□□□□ -1.44
SPG11-206ENST00000558093 ITPKAP23677 461 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 CCDC27Q2M243 656 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 FDX2Q6P4F2 183 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 RNF208Q9H0X6 261 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 GPN3Q9UHW5 284 aaPredicted RBP6.07□□□□□ -1.44
SPG11-206ENST00000558093 SPG7Q9UQ90 795 aa6.07□□□□□ -1.44
SPG11-206ENST00000558093 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
SPG11-206ENST00000558093 PTPN12Q05209 780 aaKnown RBP6.06□□□□□ -1.44
SPG11-206ENST00000558093 ZNF423Q2M1K9 1284 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 KIAA1211Q6ZU35 1233 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 SETDB2Q96T68 719 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 ZFYVE1Q9HBF4 777 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 WWC3Q9ULE0 1092 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 AKAP2Q9Y2D5 859 aa6.06□□□□□ -1.44
SPG11-206ENST00000558093 LOC100289279A0A1B0GTE1 492 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 TM4SF5O14894 197 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 B3GALT4O96024 378 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 CYP11A1P05108 521 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 XRCC5P13010 732 aaKnown RBP6.05□□□□□ -1.44
SPG11-206ENST00000558093 ZNF157P51786 506 aaPredicted RBP6.05□□□□□ -1.44
SPG11-206ENST00000558093 FGD1P98174 961 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
SPG11-206ENST00000558093 HP1BP3Q5SSJ5 553 aaPredicted RBP6.05□□□□□ -1.44
SPG11-206ENST00000558093 ANKRD34AQ69YU3 496 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 GLIS3Q8NEA6 775 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 CORO1BQ9BR76 489 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 SEMA6BQ9H3T3 888 aa6.05□□□□□ -1.44
SPG11-206ENST00000558093 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
SPG11-206ENST00000558093 MAOBP27338 520 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 GSTT1P30711 240 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 POU4F3Q15319 338 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms