RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 Q7L0L9 218 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 SPTBN5Q9NRC6 3674 aaKnown RBP13.11□□□□□ -0.31
ABCD4-227ENST00000557554 PDE8AO60658 829 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-227ENST00000557554 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 PRMT6Q96LA8 375 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-227ENST00000557554 GDF15Q99988 308 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 ELP3Q9H9T3 547 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 AOX1Q06278 1338 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
ABCD4-227ENST00000557554 CCL15-CCL14A0A0B4J2E2 113 aa13.1□□□□□ -0.31
ABCD4-227ENST00000557554 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
ABCD4-227ENST00000557554 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
ABCD4-227ENST00000557554 CCL15Q16663 113 aa13.1□□□□□ -0.31
ABCD4-227ENST00000557554 CERS5Q8N5B7 392 aa13.1□□□□□ -0.31
ABCD4-227ENST00000557554 CCER1Q8TC90 406 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-227ENST00000557554 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
ABCD4-227ENST00000557554 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-227ENST00000557554 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-227ENST00000557554 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
ABCD4-227ENST00000557554 NEFMP07197 916 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 CCL5P13501 91 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 GTF2A2P52657 109 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 GTF2IP78347 998 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 LRIT3Q3SXY7 679 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
ABCD4-227ENST00000557554 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 CHL1O00533 1208 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 EVI5O60447 810 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 HSP90B1P14625 803 aaKnown RBP13.08□□□□□ -0.32
ABCD4-227ENST00000557554 KLRK1P26718 216 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 GRK4P32298 578 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 RASA3Q14644 834 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 KIF22Q14807 665 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 C17orf99Q6UX52 265 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
ABCD4-227ENST00000557554 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
ABCD4-227ENST00000557554 JARID2Q92833 1246 aaPredicted RBP13.08□□□□□ -0.32
ABCD4-227ENST00000557554 RNF208Q9H0X6 261 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
ABCD4-227ENST00000557554 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
ABCD4-227ENST00000557554 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 SGPL1O95470 568 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 TEPSINQ96N21 525 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
ABCD4-227ENST00000557554 LEMD3Q9Y2U8 911 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
ABCD4-227ENST00000557554 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 FARP2O94887 1054 aaPredicted RBP13.06□□□□□ -0.32
ABCD4-227ENST00000557554 OSBPP22059 807 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 VGLL4Q14135 290 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
ABCD4-227ENST00000557554 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 HYPKQ9NX55 129 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 IRS2Q9Y4H2 1338 aa13.06□□□□□ -0.32
ABCD4-227ENST00000557554 PSMC4P43686 418 aa13.05□□□□□ -0.32
ABCD4-227ENST00000557554 BCAMP50895 628 aa13.05□□□□□ -0.32
ABCD4-227ENST00000557554 RIPK4P57078 832 aa13.05□□□□□ -0.32
ABCD4-227ENST00000557554 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
ABCD4-227ENST00000557554 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
ABCD4-227ENST00000557554 CD209Q9NNX6 404 aa13.05□□□□□ -0.32
ABCD4-227ENST00000557554 MYO1BO43795 1136 aa13.04□□□□□ -0.32
ABCD4-227ENST00000557554 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
ABCD4-227ENST00000557554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■□□ 15.6
ABCD4-227ENST00000557554 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
ABCD4-227ENST00000557554 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
ABCD4-227ENST00000557554 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 HOXB7P09629 217 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 CETPP11597 493 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 HOXD10P28358 340 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 CTSWP56202 376 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 RAET1EQ8TD07 263 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 GREM2Q9H772 168 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
ABCD4-227ENST00000557554 EYSQ5T1H1 3165 aa13.02□□□□□ -0.32
ABCD4-227ENST00000557554 IRF6O14896 467 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
ABCD4-227ENST00000557554 CAPN2P17655 700 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 FKBP1AP62942 108 aaKnown RBP13.02□□□□□ -0.33
ABCD4-227ENST00000557554 MYD88Q99836 296 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
ABCD4-227ENST00000557554 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 ADGRA2Q96PE1 1338 aa13.02□□□□□ -0.33
ABCD4-227ENST00000557554 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
ABCD4-227ENST00000557554 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 IL1R1P14778 569 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms