RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 SUCLG2Q96I99 432 aa11.35□□□□□ -0.59
AC004828.1-201ENST00000555303 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
AC004828.1-201ENST00000555303 MYO1BO43795 1136 aa11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 SASH1O94885 1247 aa11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 NBPF7P0C2Y1 421 aaPredicted RBP11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
AC004828.1-201ENST00000555303 SNAP23O00161 211 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 BICC1Q9H694 974 aaKnown RBP11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
AC004828.1-201ENST00000555303 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 UNCXA6NJT0 531 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 PLIN1O60240 522 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 TTLL12Q14166 644 aaPredicted RBP11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 RNF186Q9NXI6 227 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 RIPOR2Q9Y4F9 1068 aa11.32□□□□□ -0.6
AC004828.1-201ENST00000555303 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
AC004828.1-201ENST00000555303 SSC5DA1L4H1 1573 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 PPP1R12BO60237 982 aaPredicted RBP11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 TRPA1O75762 1119 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 PDE8BO95263 885 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 NOM1Q5C9Z4 860 aaKnown RBP11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 MFSD14BQ5SR56 506 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 MCOLN1Q9GZU1 580 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 HDAC5Q9UQL6 1122 aa11.3□□□□□ -0.6
AC004828.1-201ENST00000555303 GYG1P46976 350 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 TM4SF4P48230 202 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 DGKZQ13574 1117 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 SUPT20HL1Q3ZLR7 823 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 PRAMEF18Q5VWM3 479 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 VGLL2Q8N8G2 317 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 CFHR5Q9BXR6 569 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
AC004828.1-201ENST00000555303 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 VEZTQ9HBM0 779 aa11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 ANGEL1Q9UNK9 670 aaKnown RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 MAST3O60307 1309 aa11.28□□□□□ -0.6
AC004828.1-201ENST00000555303 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 UBTFL1P0CB47 393 aaPredicted RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 INHBEP58166 350 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 CDCA7LQ96GN5 454 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 JAG2Q9Y219 1238 aa11.27□□□□□ -0.61
AC004828.1-201ENST00000555303 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 EYA2O00167 538 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 CIAO1O76071 339 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 FGFR2P21802 821 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 TNNI2P48788 182 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 RGS19P49795 217 aa11.26□□□□□ -0.61
AC004828.1-201ENST00000555303 CTU1Q7Z7A3 348 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms