RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 KLRG1Q96E93 195 aa16.43■□□□□ 0.22
APEX1-208ENST00000554813 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
APEX1-208ENST00000554813 BCAMP50895 628 aa16.42■□□□□ 0.22
APEX1-208ENST00000554813 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
APEX1-208ENST00000554813 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.221e-8■■■□□ 19
APEX1-208ENST00000554813 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
APEX1-208ENST00000554813 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 CERS5Q8N5B7 392 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
APEX1-208ENST00000554813 CHMP4BQ9H444 224 aaKnown RBP16.41■□□□□ 0.22
APEX1-208ENST00000554813 GGA3Q9NZ52 723 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
APEX1-208ENST00000554813 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
APEX1-208ENST00000554813 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
APEX1-208ENST00000554813 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
APEX1-208ENST00000554813 ANGEL2Q5VTE6 544 aaKnown RBP16.4■□□□□ 0.22
APEX1-208ENST00000554813 CST9Q5W186 159 aa16.4■□□□□ 0.22
APEX1-208ENST00000554813 TBC1D22AQ8WUA7 517 aa16.4■□□□□ 0.22
APEX1-208ENST00000554813 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
APEX1-208ENST00000554813 GNL3LQ9NVN8 582 aaKnown RBP16.4■□□□□ 0.22
APEX1-208ENST00000554813 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
APEX1-208ENST00000554813 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
APEX1-208ENST00000554813 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
APEX1-208ENST00000554813 WNT10BO00744 389 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
APEX1-208ENST00000554813 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
APEX1-208ENST00000554813 POLA2Q14181 598 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 NBPF9Q3BBW0 867 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 SSH3Q8TE77 659 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
APEX1-208ENST00000554813 TFCP2Q12800 502 aa16.38■□□□□ 0.21
APEX1-208ENST00000554813 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
APEX1-208ENST00000554813 DEFB115Q30KQ5 88 aa16.38■□□□□ 0.21
APEX1-208ENST00000554813 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
APEX1-208ENST00000554813 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
APEX1-208ENST00000554813 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
APEX1-208ENST00000554813 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
APEX1-208ENST00000554813 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
APEX1-208ENST00000554813 RBM5P52756 815 aaKnown RBP eCLIP16.37■□□□□ 0.214e-13■■■□□ 17.9
APEX1-208ENST00000554813 TIMM10P62072 90 aa16.37■□□□□ 0.21
APEX1-208ENST00000554813 MTMR14Q8NCE2 650 aa16.37■□□□□ 0.21
APEX1-208ENST00000554813 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
APEX1-208ENST00000554813 ZNF646O15015 1829 aaPredicted RBP16.37■□□□□ 0.21
APEX1-208ENST00000554813 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 MYO1BO43795 1136 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
APEX1-208ENST00000554813 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 ZBED3Q96IU2 234 aaPredicted RBP16.36■□□□□ 0.21
APEX1-208ENST00000554813 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
APEX1-208ENST00000554813 A0A1B0GUL7 405 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 SEMA3EO15041 775 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 CFAP100Q494V2 611 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 TLL2Q9Y6L7 1015 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 TRPM7Q96QT4 1865 aa16.35■□□□□ 0.21
APEX1-208ENST00000554813 POLR2AP24928 1970 aaKnown RBP16.35■□□□□ 0.21
APEX1-208ENST00000554813 ADORA1P30542 326 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
APEX1-208ENST00000554813 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 APOBEC3FQ8IUX4 373 aaKnown RBP16.34■□□□□ 0.21
APEX1-208ENST00000554813 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
APEX1-208ENST00000554813 C2orf69Q8N8R5 385 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 CDCA5Q96FF9 252 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
APEX1-208ENST00000554813 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
APEX1-208ENST00000554813 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
APEX1-208ENST00000554813 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 ZBTB22O15209 634 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 PHKA1P46020 1223 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 VEGFBP49765 207 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
APEX1-208ENST00000554813 MAST3O60307 1309 aa16.32■□□□□ 0.2
APEX1-208ENST00000554813 ECE1P42892 770 aa16.32■□□□□ 0.2
APEX1-208ENST00000554813 CRKP46108 304 aa16.32■□□□□ 0.2
APEX1-208ENST00000554813 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
APEX1-208ENST00000554813 PAXIP1Q6ZW49 1069 aaPredicted RBP16.32■□□□□ 0.2
APEX1-208ENST00000554813 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
APEX1-208ENST00000554813 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
APEX1-208ENST00000554813 HMMRO75330 724 aa16.31■□□□□ 0.2
APEX1-208ENST00000554813 NF2P35240 595 aa16.31■□□□□ 0.2
APEX1-208ENST00000554813 GRIK5Q16478 980 aa16.31■□□□□ 0.2
APEX1-208ENST00000554813 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
APEX1-208ENST00000554813 ZGPATQ8N5A5 531 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms