RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 LIFRP42702 1097 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 EMC10Q5UCC4 262 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 ERICH6Q7L0X2 663 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 SLC4A9Q96Q91 983 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TSPY26PQ9H489 355 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TLR7Q9NYK1 1049 aaKnown RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 SPG7Q9UQ90 795 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 RBM8AQ9Y5S9 174 aaKnown RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 SEMA3EO15041 775 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 ONECUT3O60422 494 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 CYP21A2P08686 494 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 CANXP27824 592 aaKnown RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 PSMA5P28066 241 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TNNT2P45379 298 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 DAGLBQ8NCG7 672 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 LEO1Q8WVC0 666 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TEX13AQ9BXU3 409 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 PFASO15067 1338 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TSC2P49815 1807 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 PSDA5PKW4 1024 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 LRRC10BA6NIK2 292 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 CEBPAP49715 358 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 NLRP6P59044 892 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 SCRN1Q12765 414 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 MCMDC2Q4G0Z9 681 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TCP11L1Q9NUJ3 509 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 NENFQ9UMX5 172 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 PLXNA1Q9UIW2 1896 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 H2AFXP16104 143 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 FXR2P51116 673 aaKnown RBP eCLIP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 CBLBQ13191 982 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ORC2Q13416 577 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 SEC23AQ15436 765 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 RESP18Q5W5W9 173 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ARHGAP27Q6ZUM4 889 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ZBTB38Q8NAP3 1195 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 IGDCC4Q8TDY8 1250 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 STAG1Q8WVM7 1258 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 FMNL2Q96PY5 1086 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 SLC26A8Q96RN1 970 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 SCAND2PQ9GZW5 306 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 CYP19A1P11511 503 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 SMARCA1P28370 1054 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 PPP2R5BQ15173 497 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 CADPS2Q86UW7 1296 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 FAM200AQ8TCP9 573 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 CDCA7Q9BWT1 371 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 GOLPH3LQ9H4A5 285 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 EXOC6BQ9Y2D4 811 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 PRAMEF22A3QJZ6 481 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 FANCGO15287 622 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ATP8B1O43520 1251 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ZRANB2O95218 330 aaKnown RBP eCLIP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ZBTB48P10074 688 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 HCLS1P14317 486 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 PDCP20941 246 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ADD2P35612 726 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF75DP51815 510 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 TCIRG1Q13488 830 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ADALQ6DHV7 355 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 BRAPQ7Z569 592 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 RUBCNQ92622 972 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF496Q96IT1 587 aaPredicted RBP4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ORAI2Q96SN7 254 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 ATP6V1DQ9Y5K8 247 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 MYO3BQ8WXR4 1341 aa4.1□□□□□ -1.75
SEC23A-207ENST00000554615 EYA2O00167 538 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 RPS6KA5O75582 802 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 LCA5LO95447 670 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 PDIA3P30101 505 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 INTS5Q6P9B9 1019 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 DHX32Q7L7V1 743 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 C4orf32Q8N8J7 132 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 SYAP1Q96A49 352 aaPredicted RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 PHLPP2Q6ZVD8 1323 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 DDX58O95786 925 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 EIF5P55010 431 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 SBK1Q52WX2 424 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 RC3H1Q5TC82 1133 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 GIGYF2Q6Y7W6 1299 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 IQUBQ8NA54 791 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 LINC00301Q8NCQ3 95 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 NKX2-3Q8TAU0 364 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 PURBQ96QR8 312 aaKnown RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 USP20Q9Y2K6 914 aa4.09□□□□□ -1.75
SEC23A-207ENST00000554615 COL11A1P12107 1806 aaPredicted RBP4.09□□□□□ -1.75
SEC23A-207ENST00000554615 M0R2C6 588 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 RNF113AO15541 343 aaKnown RBP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 SRGAP3O43295 1099 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 HSPD1P10809 573 aaKnown RBP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 GJB2P29033 226 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 IL6STP40189 918 aaPredicted RBP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 USP5P45974 858 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 AMPHP49418 695 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 SLC20A2Q08357 652 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 SAFB2Q14151 953 aaKnown RBP eCLIP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 SF3B3Q15393 1217 aaKnown RBP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 NEUROD2Q15784 382 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms