RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
PABPN1-203ENST00000553960 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
PABPN1-203ENST00000553960 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
PABPN1-203ENST00000553960 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PABPN1-203ENST00000553960 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
PABPN1-203ENST00000553960 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 KCNJ4P48050 445 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 MCM2P49736 904 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 GPSM2P81274 684 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 SPTY2D1Q68D10 685 aaPredicted RBP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 FBXL16Q8N461 479 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 EDC3Q96F86 508 aaKnown RBP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 MRIQ9BWK5 157 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
PABPN1-203ENST00000553960 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
PABPN1-203ENST00000553960 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
PABPN1-203ENST00000553960 PDE6AP16499 860 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 GNAT2P19087 354 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 KCNA3P22001 575 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 BECN1Q14457 450 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 MPNDQ8N594 471 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 PSMD1Q99460 953 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
PABPN1-203ENST00000553960 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
PABPN1-203ENST00000553960 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
PABPN1-203ENST00000553960 SNAP23O00161 211 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 GYG1P46976 350 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 KRT32Q14532 448 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
PABPN1-203ENST00000553960 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 SUPT20HQ8NEM7 779 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 EYA3Q99504 573 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 MAST3O60307 1309 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 PSME4Q14997 1843 aa13.06□□□□□ -0.32
PABPN1-203ENST00000553960 POLD1P28340 1107 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 MMP14P50281 582 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 PPP4CP60510 307 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
PABPN1-203ENST00000553960 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
PABPN1-203ENST00000553960 PDGFDQ9GZP0 370 aaPredicted RBP13.05□□□□□ -0.32
PABPN1-203ENST00000553960 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
PABPN1-203ENST00000553960 FOXP2O15409 715 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 UFL1O94874 794 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 PTH1RQ03431 593 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 PI16Q6UXB8 463 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
PABPN1-203ENST00000553960 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
PABPN1-203ENST00000553960 WTIPA6NIX2 430 aaPredicted RBP13.03□□□□□ -0.32
PABPN1-203ENST00000553960 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
PABPN1-203ENST00000553960 PSMA5P28066 241 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 PTGER2P43116 358 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
PABPN1-203ENST00000553960 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
PABPN1-203ENST00000553960 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 CHD4Q14839 1912 aa13.03□□□□□ -0.32
PABPN1-203ENST00000553960 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.32
PABPN1-203ENST00000553960 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.32
PABPN1-203ENST00000553960 SLC27A2O14975 620 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 GPAA1O43292 621 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 ST18O60284 1047 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
PABPN1-203ENST00000553960 KLRK1P26718 216 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 GSTO1P78417 241 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms