RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ANTXR1Q9H6X2 564 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 DIAPH3Q9NSV4 1193 aa14.24□□□□□ -0.13
NEK9-202ENST00000553823 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
NEK9-202ENST00000553823 CYP2E1P05181 493 aaPredicted RBP14.23□□□□□ -0.13
NEK9-202ENST00000553823 ESYT1Q9BSJ8 1104 aa14.23□□□□□ -0.13
NEK9-202ENST00000553823 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
NEK9-202ENST00000553823 IQSEC3Q9UPP2 1182 aaPredicted RBP14.23□□□□□ -0.13
NEK9-202ENST00000553823 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
NEK9-202ENST00000553823 C21orf2O43822 256 aa14.22□□□□□ -0.13
NEK9-202ENST00000553823 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
NEK9-202ENST00000553823 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
NEK9-202ENST00000553823 LRRFIP1Q32MZ4 808 aaKnown RBP14.22□□□□□ -0.13
NEK9-202ENST00000553823 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
NEK9-202ENST00000553823 DALRD3Q5D0E6 543 aaKnown RBP14.22□□□□□ -0.13
NEK9-202ENST00000553823 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
NEK9-202ENST00000553823 EYA3Q99504 573 aa14.22□□□□□ -0.13
NEK9-202ENST00000553823 UPF2Q9HAU5 1272 aaKnown RBP14.22□□□□□ -0.13
NEK9-202ENST00000553823 CHD4Q14839 1912 aa14.21□□□□□ -0.13
NEK9-202ENST00000553823 PDS5AQ29RF7 1337 aaKnown RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 SOGA3Q5TF21 947 aa14.21□□□□□ -0.13
NEK9-202ENST00000553823 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 RTKN2Q8IZC4 609 aa14.21□□□□□ -0.13
NEK9-202ENST00000553823 TDRD7Q8NHU6 1098 aaKnown RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 RTFDC1Q9BY42 306 aaPredicted RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.13
NEK9-202ENST00000553823 CD209Q9NNX6 404 aa14.21□□□□□ -0.13
NEK9-202ENST00000553823 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
NEK9-202ENST00000553823 SNED1Q8TER0 1413 aa14.21□□□□□ -0.13
NEK9-202ENST00000553823 COL1A1P02452 1464 aaPredicted RBP14.2□□□□□ -0.14
NEK9-202ENST00000553823 RIMBP2O15034 1052 aa14.2□□□□□ -0.14
NEK9-202ENST00000553823 REC8O95072 547 aa14.2□□□□□ -0.14
NEK9-202ENST00000553823 ZFYP08048 801 aaPredicted RBP14.2□□□□□ -0.14
NEK9-202ENST00000553823 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
NEK9-202ENST00000553823 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
NEK9-202ENST00000553823 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
NEK9-202ENST00000553823 COA1Q9GZY4 146 aa14.2□□□□□ -0.14
NEK9-202ENST00000553823 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
NEK9-202ENST00000553823 SGSM2O43147 1006 aa14.19□□□□□ -0.14
NEK9-202ENST00000553823 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
NEK9-202ENST00000553823 IL1R1P14778 569 aa14.19□□□□□ -0.14
NEK9-202ENST00000553823 ZSCAN25Q6NSZ9 544 aa14.19□□□□□ -0.14
NEK9-202ENST00000553823 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
NEK9-202ENST00000553823 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 RAD50Q92878 1312 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 CHAF1AQ13111 956 aaPredicted RBP14.18□□□□□ -0.14
NEK9-202ENST00000553823 WDR66Q8TBY9 1149 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 PSMD1Q99460 953 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 LRP2BPQ9P2M1 347 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 ARFGEF1Q9Y6D6 1849 aa14.18□□□□□ -0.14
NEK9-202ENST00000553823 FER1L6Q2WGJ9 1857 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 G3V3G9 751 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 ADD2P35612 726 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 ZMYM1Q5SVZ6 1142 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 SLC9C2Q5TAH2 1124 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 NLGN2Q8NFZ4 835 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 IL25Q9H293 177 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 ABCF2Q9UG63 623 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 WWC3Q9ULE0 1092 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
NEK9-202ENST00000553823 SALL1Q9NSC2 1324 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 CHGBP05060 677 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 PDE6AP16499 860 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 KIAA2012Q0VF49 1180 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 UBE3CQ15386 1083 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 DOK7Q18PE1 504 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
NEK9-202ENST00000553823 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
NEK9-202ENST00000553823 APPBP2Q92624 585 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 FHDC1Q9C0D6 1143 aaPredicted RBP14.16□□□□□ -0.14
NEK9-202ENST00000553823 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
NEK9-202ENST00000553823 FAM205AQ6ZU69 1335 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 PPIP5K2O43314 1243 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
NEK9-202ENST00000553823 IGSF3O75054 1194 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 AOC3Q16853 763 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 SLFNL1Q499Z3 407 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 PODNQ7Z5L7 613 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 TBC1D32Q96NH3 1257 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 C22orf23Q9BZE7 217 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 JAG2Q9Y219 1238 aa14.15□□□□□ -0.14
NEK9-202ENST00000553823 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
NEK9-202ENST00000553823 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.15
NEK9-202ENST00000553823 SCN9AQ15858 1988 aa14.14□□□□□ -0.15
NEK9-202ENST00000553823 TCRBV5S4A2TA0A5A2 114 aa14.14□□□□□ -0.15
NEK9-202ENST00000553823 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
NEK9-202ENST00000553823 TBC1D22AQ8WUA7 517 aa14.14□□□□□ -0.15
NEK9-202ENST00000553823 OSBP2Q969R2 916 aa14.14□□□□□ -0.15
NEK9-202ENST00000553823 SEC62Q99442 399 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 831.3 ms