RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 C20orf194Q5TEA3 1177 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 ZNF408Q9H9D4 720 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 PA2G4Q9UQ80 394 aaKnown RBP21.5■■□□□ 1.03
CDK4-208ENST00000551706 VIL1P09327 827 aaKnown RBP21.49■■□□□ 1.03
CDK4-208ENST00000551706 GMPSP49915 693 aaPredicted RBP21.49■■□□□ 1.03
CDK4-208ENST00000551706 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
CDK4-208ENST00000551706 DPF2Q92785 391 aa21.49■■□□□ 1.03
CDK4-208ENST00000551706 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
CDK4-208ENST00000551706 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 USP17L3A6NCW0 530 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 USP17L4A6NCW7 530 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 IFIT1P09914 478 aaKnown RBP21.48■■□□□ 1.03
CDK4-208ENST00000551706 POLA2Q14181 598 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 USP17L1Q7RTZ2 530 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 ZIC5Q96T25 663 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 CD209Q9NNX6 404 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
CDK4-208ENST00000551706 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
CDK4-208ENST00000551706 LPIN2Q92539 896 aa21.47■■□□□ 1.03
CDK4-208ENST00000551706 SLC5A1P13866 664 aa21.46■■□□□ 1.03
CDK4-208ENST00000551706 FGFR2P21802 821 aa21.46■■□□□ 1.03
CDK4-208ENST00000551706 HIBADHP31937 336 aaKnown RBP21.46■■□□□ 1.03
CDK4-208ENST00000551706 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.034e-8■□□□□ 10.3
CDK4-208ENST00000551706 CAVIN4Q5BKX8 364 aa21.46■■□□□ 1.03
CDK4-208ENST00000551706 STRIP1Q5VSL9 837 aa21.46■■□□□ 1.03
CDK4-208ENST00000551706 RSBN1LQ6PCB5 846 aaPredicted RBP21.46■■□□□ 1.03
CDK4-208ENST00000551706 ZNF609O15014 1411 aa21.46■■□□□ 1.03
CDK4-208ENST00000551706 IL1R1P14778 569 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 CDC37L1Q7L3B6 337 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 RPAP2Q8IXW5 612 aaPredicted RBP21.45■■□□□ 1.02
CDK4-208ENST00000551706 AGBL3Q8NEM8 1001 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 ZC3H15Q8WU90 426 aaKnown RBP21.45■■□□□ 1.02
CDK4-208ENST00000551706 FAM84BQ96KN1 310 aaPredicted RBP21.45■■□□□ 1.02
CDK4-208ENST00000551706 SAGE1Q9NXZ1 904 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 ZBTB12Q9Y330 459 aaPredicted RBP21.45■■□□□ 1.02
CDK4-208ENST00000551706 MYO3BQ8WXR4 1341 aa21.45■■□□□ 1.02
CDK4-208ENST00000551706 H7C1D1 291 aa21.44■■□□□ 1.02
CDK4-208ENST00000551706 HUNKP57058 714 aa21.44■■□□□ 1.02
CDK4-208ENST00000551706 TTLL5Q6EMB2 1281 aa21.44■■□□□ 1.02
CDK4-208ENST00000551706 CNOT7Q9UIV1 285 aaKnown RBP21.44■■□□□ 1.02
CDK4-208ENST00000551706 AKAP2Q9Y2D5 859 aa21.44■■□□□ 1.02
CDK4-208ENST00000551706 HMMRO75330 724 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 GYG1P46976 350 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 ATP2B3Q16720 1220 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 DACT2Q5SW24 774 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 FBXO33Q7Z6M2 555 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
CDK4-208ENST00000551706 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
CDK4-208ENST00000551706 GTF2IP78347 998 aa21.42■■□□□ 1.02
CDK4-208ENST00000551706 MICALL2Q8IY33 904 aa21.42■■□□□ 1.02
CDK4-208ENST00000551706 TDRD7Q8NHU6 1098 aaKnown RBP21.42■■□□□ 1.02
CDK4-208ENST00000551706 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
CDK4-208ENST00000551706 SCN9AQ15858 1988 aa21.41■■□□□ 1.02
CDK4-208ENST00000551706 SASH1O94885 1247 aa21.41■■□□□ 1.02
CDK4-208ENST00000551706 MMP14P50281 582 aa21.41■■□□□ 1.02
CDK4-208ENST00000551706 HIRAP54198 1017 aaPredicted RBP21.41■■□□□ 1.02
CDK4-208ENST00000551706 OS9Q13438 667 aaPredicted RBP21.41■■□□□ 1.02
CDK4-208ENST00000551706 TFCP2Q12800 502 aa21.4■■□□□ 1.02
CDK4-208ENST00000551706 GMLQ99445 158 aa21.4■■□□□ 1.02
CDK4-208ENST00000551706 FAM155AB1AL88 458 aaPredicted RBP21.39■■□□□ 1.01
CDK4-208ENST00000551706 USP17L8P0C7I0 530 aa21.39■■□□□ 1.01
CDK4-208ENST00000551706 FKBP1AP62942 108 aaKnown RBP21.39■■□□□ 1.01
CDK4-208ENST00000551706 HSP90AB4PQ58FF6 505 aa21.39■■□□□ 1.01
CDK4-208ENST00000551706 RGMBQ6NW40 437 aa21.39■■□□□ 1.01
CDK4-208ENST00000551706 PSME4Q14997 1843 aa21.39■■□□□ 1.01
CDK4-208ENST00000551706 FAM205AQ6ZU69 1335 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 FRAT2O75474 233 aaPredicted RBP21.38■■□□□ 1.01
CDK4-208ENST00000551706 TRPA1O75762 1119 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 BCAMP50895 628 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 ZNF280AP59817 542 aaPredicted RBP21.38■■□□□ 1.01
CDK4-208ENST00000551706 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
CDK4-208ENST00000551706 USP48Q86UV5 1035 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 OGFOD1Q8N543 542 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 TRPM4Q8TD43 1214 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 GNL3LQ9NVN8 582 aaKnown RBP21.38■■□□□ 1.01
CDK4-208ENST00000551706 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
CDK4-208ENST00000551706 A0A1B0GUL7 405 aa21.37■■□□□ 1.01
CDK4-208ENST00000551706 CTU1Q7Z7A3 348 aaKnown RBP21.37■■□□□ 1.01
CDK4-208ENST00000551706 ERC1Q8IUD2 1116 aa21.37■■□□□ 1.01
CDK4-208ENST00000551706 CCDC102AQ96A19 550 aa21.37■■□□□ 1.01
CDK4-208ENST00000551706 GPR108Q9NPR9 543 aa21.37■■□□□ 1.01
CDK4-208ENST00000551706 TIMM10P62072 90 aa21.36■■□□□ 1.01
CDK4-208ENST00000551706 HDAC9Q9UKV0 1011 aa21.36■■□□□ 1.01
CDK4-208ENST00000551706 SHTN1A0MZ66 631 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 ZBTB22O15209 634 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 SIRT2Q8IXJ6 389 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 MXD3Q9BW11 206 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 AKAP11Q9UKA4 1901 aa21.35■■□□□ 1.01
CDK4-208ENST00000551706 ZNF157P51786 506 aaPredicted RBP21.34■■□□□ 1.01
CDK4-208ENST00000551706 KIF4BQ2VIQ3 1234 aa21.34■■□□□ 1.01
CDK4-208ENST00000551706 DLK2Q6UY11 383 aa21.34■■□□□ 1.01
CDK4-208ENST00000551706 SAMD7Q7Z3H4 446 aa21.34■■□□□ 1.01
CDK4-208ENST00000551706 C2orf69Q8N8R5 385 aa21.34■■□□□ 1.01
CDK4-208ENST00000551706 NEUROD6Q96NK8 337 aa21.34■■□□□ 1.01
CDK4-208ENST00000551706 GBA2Q9HCG7 927 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms