RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 CARMIL3Q8ND23 1372 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 AFDNP55196 1824 aaKnown RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 MCAMP43121 646 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ZNF75DP51815 510 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 NKX1-1Q15270 411 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 GLIPR1L2Q4G1C9 344 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 KIAA1524Q8TCG1 905 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 APPBP2Q92624 585 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ATG3Q9NT62 314 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ARFGEF2Q9Y6D5 1785 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 STK38Q15208 465 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ZNF274Q96GC6 653 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 RCOR1Q9UKL0 485 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 CLIC4Q9Y696 253 aa10.76□□□□□ -0.69
UBE2N-205ENST00000550657 ZNF335Q9H4Z2 1342 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-205ENST00000550657 DYNC1I1O14576 645 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 IRS4O14654 1257 aaPredicted RBP10.75□□□□□ -0.69
UBE2N-205ENST00000550657 AIFM3Q96NN9 605 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 COL5A2P05997 1499 aaPredicted RBP10.75□□□□□ -0.69
UBE2N-205ENST00000550657 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 XIRP1Q702N8 1843 aaKnown RBP10.75□□□□□ -0.69
UBE2N-205ENST00000550657 NCOA7Q8NI08 942 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 NKX2-3Q8TAU0 364 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 PCDHA7Q9UN72 937 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 ZBTB1Q9Y2K1 713 aa10.75□□□□□ -0.69
UBE2N-205ENST00000550657 BIN1O00499 593 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 ZFYP08048 801 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 ANTXR2P58335 489 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 TRDNQ13061 729 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 ISM2Q6H9L7 571 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 FILIP1Q7Z7B0 1213 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 NLRP10Q86W26 655 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 MYRIPQ8NFW9 859 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 C16orf45Q96MC5 204 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 AGXT2Q9BYV1 514 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 PIH1D3Q9NQM4 214 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 MAP3K15Q6ZN16 1313 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 PHKA1P46020 1223 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 SNW1Q13573 536 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 TDRD7Q8NHU6 1098 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 MYL10Q9BUA6 226 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 TPM3P06753 285 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 NDUFA8P51970 172 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 CTSWP56202 376 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 CHAF1AQ13111 956 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 ZRSR1Q15695 479 aaKnown RBP10.74□□□□□ -0.69
UBE2N-205ENST00000550657 STX1AQ16623 288 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 CCDC144BQ3MJ40 725 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 SPTLC3Q9NUV7 552 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 RIPOR2Q9Y4F9 1068 aa10.74□□□□□ -0.69
UBE2N-205ENST00000550657 SALL1Q9NSC2 1324 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 B4E1Z4 1266 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 CSF1RP07333 972 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 GNL2Q13823 731 aaKnown RBP10.73□□□□□ -0.69
UBE2N-205ENST00000550657 NFXL1Q6ZNB6 911 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 TBC1D10CQ8IV04 446 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 MB21D2Q8IYB1 491 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-205ENST00000550657 AOPEPQ8N6M6 819 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 PHKBQ93100 1093 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 SENP2Q9HC62 589 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 TOMM22Q9NS69 142 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 HPS5Q9UPZ3 1129 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-205ENST00000550657 ZNF532Q9HCE3 1301 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 ZSCAN25Q6NSZ9 544 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBE2N-205ENST00000550657 MRPS27Q92552 414 aaKnown RBP10.73□□□□□ -0.69
UBE2N-205ENST00000550657 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 WWC3Q9ULE0 1092 aa10.73□□□□□ -0.69
UBE2N-205ENST00000550657 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 DHX16O60231 1041 aaKnown RBP10.72□□□□□ -0.69
UBE2N-205ENST00000550657 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
UBE2N-205ENST00000550657 GLI3P10071 1580 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 IQCB1Q15051 598 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
UBE2N-205ENST00000550657 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 CYB5R4Q7L1T6 521 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 DZIP3Q86Y13 1208 aaKnown RBP10.72□□□□□ -0.69
UBE2N-205ENST00000550657 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
UBE2N-205ENST00000550657 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
UBE2N-205ENST00000550657 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms