RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 FBXO33Q7Z6M2 555 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
HDAC7-227ENST00000548080 LRRCC1Q9C099 1032 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 GPRC5DQ9NZD1 345 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 ZNF609O15014 1411 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 A0A1B0GUL7 405 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 CHAF1AQ13111 956 aaPredicted RBP21.32■■□□□ 1
HDAC7-227ENST00000548080 CAVIN4Q5BKX8 364 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 DACT2Q5SW24 774 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 MICALL2Q8IY33 904 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 NEUROD6Q96NK8 337 aa21.32■■□□□ 1
HDAC7-227ENST00000548080 CNOT7Q9UIV1 285 aaKnown RBP21.32■■□□□ 1
HDAC7-227ENST00000548080 IQCA1LA6NCM1 817 aa21.31■■□□□ 1
HDAC7-227ENST00000548080 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
HDAC7-227ENST00000548080 TDRD7Q8NHU6 1098 aaKnown RBP21.31■■□□□ 1
HDAC7-227ENST00000548080 MYH13Q9UKX3 1938 aa21.3■■□□□ 1
HDAC7-227ENST00000548080 PHKA1P46020 1223 aa21.3■■□□□ 1
HDAC7-227ENST00000548080 STRIP1Q5VSL9 837 aa21.3■■□□□ 1
HDAC7-227ENST00000548080 FRAT2O75474 233 aaPredicted RBP21.29■■□□□ 1
HDAC7-227ENST00000548080 CERS5Q8N5B7 392 aa21.29■■□□□ 1
HDAC7-227ENST00000548080 TRPM4Q8TD43 1214 aa21.29■■□□□ 1
HDAC7-227ENST00000548080 KIF1BPQ96EK5 621 aa21.29■■□□□ 1
HDAC7-227ENST00000548080 XAGE2Q96GT9 111 aa21.29■■□□□ 1
HDAC7-227ENST00000548080 AKAP2Q9Y2D5 859 aa21.29■■□□□ 1
HDAC7-227ENST00000548080 EGFRP00533 1210 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 TBC1D10BQ4KMP7 808 aaPredicted RBP21.28■■□□□ 1
HDAC7-227ENST00000548080 RBM26Q5T8P6 1007 aaKnown RBP21.28■■□□□ 1
HDAC7-227ENST00000548080 SAMD7Q7Z3H4 446 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 ERC1Q8IUD2 1116 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 RHPN1Q8TCX5 695 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 GMLQ99445 158 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 IL1RAPL2Q9NP60 686 aa21.28■■□□□ 1
HDAC7-227ENST00000548080 COL1A1P02452 1464 aaPredicted RBP21.28■■□□□ 1
HDAC7-227ENST00000548080 F8W031 263 aaPredicted RBP21.27■■□□□ 1
HDAC7-227ENST00000548080 RPS12P25398 132 aaKnown RBP21.27■■□□□ 1
HDAC7-227ENST00000548080 TNNI3KQ59H18 835 aa21.27■■□□□ 1
HDAC7-227ENST00000548080 KIAA0825Q8IV33 1275 aa21.27■■□□□ 1
HDAC7-227ENST00000548080 CLEC11AQ9Y240 323 aa21.27■■□□□ 1
HDAC7-227ENST00000548080 FPGT-TNNI3KV9GXZ4 949 aa21.27■■□□□ 1
HDAC7-227ENST00000548080 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 DPF2Q92785 391 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 TLR7Q9NYK1 1049 aaKnown RBP21.26■□□□□ 0.99
HDAC7-227ENST00000548080 H7C1D1 291 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 TOMM70O94826 608 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 CCDC102BQ68D86 513 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 PLEKHM2Q8IWE5 1019 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 DBNDD2Q9BQY9 259 aa21.26■□□□□ 0.99
HDAC7-227ENST00000548080 CCDC8Q9H0W5 538 aaPredicted RBP21.26■□□□□ 0.99
HDAC7-227ENST00000548080 ADARB2Q9NS39 739 aaKnown RBP21.26■□□□□ 0.99
HDAC7-227ENST00000548080 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
HDAC7-227ENST00000548080 HIRAP54198 1017 aaPredicted RBP21.25■□□□□ 0.99
HDAC7-227ENST00000548080 GRIK5Q16478 980 aa21.25■□□□□ 0.99
HDAC7-227ENST00000548080 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
HDAC7-227ENST00000548080 FAM205AQ6ZU69 1335 aa21.24■□□□□ 0.99
HDAC7-227ENST00000548080 USP17L8P0C7I0 530 aa21.24■□□□□ 0.99
HDAC7-227ENST00000548080 MFSD14BQ5SR56 506 aa21.24■□□□□ 0.99
HDAC7-227ENST00000548080 EAF2Q96CJ1 260 aaPredicted RBP21.24■□□□□ 0.99
HDAC7-227ENST00000548080 RBM46Q8TBY0 533 aaKnown RBP21.23■□□□□ 0.99
HDAC7-227ENST00000548080 OTUD7AQ8TE49 926 aaPredicted RBP21.23■□□□□ 0.99
HDAC7-227ENST00000548080 GPR108Q9NPR9 543 aa21.23■□□□□ 0.99
HDAC7-227ENST00000548080 TSHZ2Q9NRE2 1034 aa21.23■□□□□ 0.99
HDAC7-227ENST00000548080 MAP1SQ66K74 1059 aaPredicted RBP21.22■□□□□ 0.99
HDAC7-227ENST00000548080 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
HDAC7-227ENST00000548080 AACSQ86V21 672 aa21.22■□□□□ 0.99
HDAC7-227ENST00000548080 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
HDAC7-227ENST00000548080 DBNLQ9UJU6 430 aaKnown RBP21.22■□□□□ 0.99
HDAC7-227ENST00000548080 ASTN2O75129 1339 aaPredicted RBP21.22■□□□□ 0.99
HDAC7-227ENST00000548080 MYO3BQ8WXR4 1341 aa21.22■□□□□ 0.99
HDAC7-227ENST00000548080 C1QTNF8P60827 252 aa21.21■□□□□ 0.99
HDAC7-227ENST00000548080 RASGRF1Q13972 1273 aa21.21■□□□□ 0.99
HDAC7-227ENST00000548080 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
HDAC7-227ENST00000548080 USP50Q70EL3 339 aaPredicted RBP21.21■□□□□ 0.99
HDAC7-227ENST00000548080 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
HDAC7-227ENST00000548080 GNL3LQ9NVN8 582 aaKnown RBP21.21■□□□□ 0.99
HDAC7-227ENST00000548080 PCDHAC2Q9Y5I4 1007 aa21.21■□□□□ 0.99
HDAC7-227ENST00000548080 ZNF280AP59817 542 aaPredicted RBP21.2■□□□□ 0.98
HDAC7-227ENST00000548080 SCARF1Q14162 830 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 CHADLQ6NUI6 762 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 MYOZ2Q9NPC6 264 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 CLASRPQ8N2M8 674 aaKnown RBP21.2■□□□□ 0.98
HDAC7-227ENST00000548080 SMC1BQ8NDV3 1235 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 BACH2Q9BYV9 841 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 OSBPL3Q9H4L5 887 aa21.2■□□□□ 0.98
HDAC7-227ENST00000548080 SALL3Q9BXA9 1300 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 PDE1AP54750 535 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 BMP2KLQ5H9B9 411 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 TTC39AQ5SRH9 613 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 SNRKQ9NRH2 765 aa21.19■□□□□ 0.98
HDAC7-227ENST00000548080 POLR2AP24928 1970 aaKnown RBP21.18■□□□□ 0.98
HDAC7-227ENST00000548080 MX1P20591 662 aa21.18■□□□□ 0.98
HDAC7-227ENST00000548080 FKBP1AP62942 108 aaKnown RBP21.18■□□□□ 0.98
HDAC7-227ENST00000548080 FMR1Q06787 632 aaKnown RBP eCLIP21.18■□□□□ 0.98
HDAC7-227ENST00000548080 STAP2Q9UGK3 403 aa21.18■□□□□ 0.98
HDAC7-227ENST00000548080 DENND2AQ9ULE3 1009 aa21.18■□□□□ 0.98
HDAC7-227ENST00000548080 TTF2Q9UNY4 1162 aaKnown RBP21.18■□□□□ 0.98
HDAC7-227ENST00000548080 SCAF8Q9UPN6 1271 aaKnown RBP21.18■□□□□ 0.98
HDAC7-227ENST00000548080 MCAMP43121 646 aa21.17■□□□□ 0.98
HDAC7-227ENST00000548080 NBPF9Q3BBW0 867 aa21.17■□□□□ 0.98
HDAC7-227ENST00000548080 C8orf34Q49A92 452 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms