RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 RFX5P48382 616 aaPredicted RBP13.45□□□□□ -0.26
CHEK1-218ENST00000544373 UBE4AQ14139 1066 aa13.45□□□□□ -0.26
CHEK1-218ENST00000544373 ZBED3Q96IU2 234 aaPredicted RBP13.45□□□□□ -0.26
CHEK1-218ENST00000544373 MROH5Q6ZUA9 1318 aa13.45□□□□□ -0.26
CHEK1-218ENST00000544373 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
CHEK1-218ENST00000544373 LBX1P52954 281 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 VGLL2Q8N8G2 317 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 C2orf69Q8N8R5 385 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
CHEK1-218ENST00000544373 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 PSME4Q14997 1843 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 BCAR3O75815 825 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 MAP2K2P36507 400 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 MOB2Q70IA6 237 aa13.44□□□□□ -0.26
CHEK1-218ENST00000544373 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
CHEK1-218ENST00000544373 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
CHEK1-218ENST00000544373 AOX1Q06278 1338 aa13.43□□□□□ -0.26
CHEK1-218ENST00000544373 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CHEK1-218ENST00000544373 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 FAM155AB1AL88 458 aaPredicted RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 PDE8BO95263 885 aa13.43□□□□□ -0.26
CHEK1-218ENST00000544373 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 PTPN12Q05209 780 aaKnown RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 RGMBQ6NW40 437 aa13.43□□□□□ -0.26
CHEK1-218ENST00000544373 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
CHEK1-218ENST00000544373 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
CHEK1-218ENST00000544373 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
CHEK1-218ENST00000544373 FBXO33Q7Z6M2 555 aa13.42□□□□□ -0.26
CHEK1-218ENST00000544373 MEIS3Q99687 375 aa13.42□□□□□ -0.26
CHEK1-218ENST00000544373 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
CHEK1-218ENST00000544373 LRRFIP2Q9Y608 721 aaKnown RBP13.42□□□□□ -0.26
CHEK1-218ENST00000544373 FAM205AQ6ZU69 1335 aa13.42□□□□□ -0.26
CHEK1-218ENST00000544373 EYA2O00167 538 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 BCAMP50895 628 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 ZNF157P51786 506 aaPredicted RBP13.41□□□□□ -0.26
CHEK1-218ENST00000544373 GRIK5Q16478 980 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
CHEK1-218ENST00000544373 MMP14P50281 582 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 MFSD14BQ5SR56 506 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
CHEK1-218ENST00000544373 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
CHEK1-218ENST00000544373 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 TRIM27P14373 513 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 FGFR2P21802 821 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
CHEK1-218ENST00000544373 NOGQ13253 232 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.26
CHEK1-218ENST00000544373 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 SIL1Q9H173 461 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 THSD7BQ9C0I4 1608 aa13.4□□□□□ -0.26
CHEK1-218ENST00000544373 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 KIF23Q02241 960 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-218ENST00000544373 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 DEFB129Q9H1M3 183 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
CHEK1-218ENST00000544373 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
CHEK1-218ENST00000544373 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
CHEK1-218ENST00000544373 PRKG1Q13976 671 aa13.38□□□□□ -0.27
CHEK1-218ENST00000544373 PUM3Q15397 648 aaKnown RBP13.38□□□□□ -0.27
CHEK1-218ENST00000544373 CCDC102AQ96A19 550 aa13.38□□□□□ -0.27
CHEK1-218ENST00000544373 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
CHEK1-218ENST00000544373 ABCB7O75027 752 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 SLC10A3P09131 477 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 RBM5P52756 815 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHEK1-218ENST00000544373 FKBP1BP68106 108 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 CAVIN4Q5BKX8 364 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
CHEK1-218ENST00000544373 TTLL12Q14166 644 aaPredicted RBP13.37□□□□□ -0.27
CHEK1-218ENST00000544373 VEZTQ9HBM0 779 aa13.37□□□□□ -0.27
CHEK1-218ENST00000544373 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
CHEK1-218ENST00000544373 FRAT2O75474 233 aaPredicted RBP13.36□□□□□ -0.27
CHEK1-218ENST00000544373 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
CHEK1-218ENST00000544373 LPIN2Q92539 896 aa13.36□□□□□ -0.27
CHEK1-218ENST00000544373 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
CHEK1-218ENST00000544373 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
CHEK1-218ENST00000544373 CIAO1O76071 339 aa13.35□□□□□ -0.27
CHEK1-218ENST00000544373 DZIP1LQ8IYY4 767 aaKnown RBP13.35□□□□□ -0.27
CHEK1-218ENST00000544373 TDRD3Q9H7E2 651 aaKnown RBP13.35□□□□□ -0.27
CHEK1-218ENST00000544373 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
CHEK1-218ENST00000544373 GNAI3P08754 354 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 SLC5A1P13866 664 aa13.34□□□□□ -0.27
CHEK1-218ENST00000544373 NF2P35240 595 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms