RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IGHDP01880 384 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 TRIM63Q969Q1 353 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 ALG1Q9BT22 464 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 CARD10Q9BWT7 1032 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 ABCA8O94911 1581 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 STX6O43752 255 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 MCM4P33991 863 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 RPS8P62241 208 aaKnown RBP7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 ESYT1Q9BSJ8 1104 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 DCTPP1Q9H773 170 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 ARHGEF5Q12774 1597 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 SBNO2Q9Y2G9 1366 aa7.9□□□□□ -1.15
SRGAP1-206ENST00000543397 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 SIK1P57059 783 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 KIAA1328Q86T90 577 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 PANK2Q9BZ23 570 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 IVNS1ABPQ9Y6Y0 642 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 PTPRTO14522 1441 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CTAGE5O15320 804 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CALML3P27482 149 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CCDC40Q4G0X9 1142 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CCDC174Q6PII3 467 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 LPIN2Q92539 896 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 BRD1O95696 1058 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 EAPPQ56P03 285 aaPredicted RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TAF4BQ92750 862 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TAF5LO75529 589 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TCIRG1Q13488 830 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 GCKRQ14397 625 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 ARHGAP29Q52LW3 1261 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 TEX35Q5T0J7 233 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CNKSR1Q969H4 720 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CA8P35219 290 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 EIF4A1P60842 406 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 ZRSR2Q15696 482 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 INSRP06213 1382 aa7.89□□□□□ -1.15
SRGAP1-206ENST00000543397 DYTNA2CJ06 578 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 SPA17Q15506 151 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 MBD5Q9P267 1494 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 GNA11P29992 359 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 MTIF2P46199 727 aaKnown RBP7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 JAKMIP3Q5VZ66 844 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 Q6ZUG5 572 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 ARHGAP27Q6ZUM4 889 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 USP37Q86T82 979 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 C2CD5Q86YS7 1000 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 CCDC171Q6TFL3 1326 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 NCBP1Q09161 790 aaKnown RBP7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 PRKG1Q13976 671 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 TNNI3KQ59H18 835 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 CCDC102BQ68D86 513 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 TCHPQ9BT92 498 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 FPGT-TNNI3KV9GXZ4 949 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 MROH5Q6ZUA9 1318 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 CHD1O14646 1710 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 ARHGEF25Q86VW2 580 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 NECAB1Q8N987 351 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 DDX19AQ9NUU7 478 aaKnown RBP7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 USP19O94966 1318 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 RAD50Q92878 1312 aa7.88□□□□□ -1.15
SRGAP1-206ENST00000543397 TNFAIP1Q13829 316 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 BTN2A1Q7KYR7 527 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 KLHDC4Q8TBB5 520 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 PARP1P09874 1014 aaKnown RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 USP8P40818 1118 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 BRDTQ58F21 947 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SUDS3Q9H7L9 328 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 PLXNC1O60486 1568 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SYCE3A1L190 88 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SKIDA1Q1XH10 827 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 TDRD12Q587J7 1177 aaKnown RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 CCDC183Q5T5S1 534 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SMYD5Q6GMV2 418 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 UNC5CLQ8IV45 518 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 BACH1O14867 736 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 FAM43BQ6ZT52 329 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 ZBTB40Q9NUA8 1239 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 ERBB4Q15303 1308 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SAMD9LQ8IVG5 1584 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 SFPQP23246 707 aaKnown RBP eCLIP7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 MAP3K9P80192 1104 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 EXOC1Q9NV70 894 aa7.87□□□□□ -1.15
SRGAP1-206ENST00000543397 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms