RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PES1O00541 588 aaKnown RBP5.13□□□□□ -1.59
SNHG1-219ENST00000542112 CAPN5O15484 640 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-219ENST00000542112 SPINT1O43278 529 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 ATP8B1O43520 1251 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 NDUFB5O43674 189 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 HTATSF1O43719 755 aaKnown RBP5.13□□□□□ -1.59
SNHG1-219ENST00000542112 CPP00450 1065 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 MPSTP25325 297 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 TPM4P67936 248 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 XPCQ01831 940 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-219ENST00000542112 TMED1Q13445 227 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 COL19A1Q14993 1142 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 FILIP1LQ4L180 1135 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 SLC27A3Q5K4L6 730 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 NLRP13Q86W25 1043 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 ZDHHC1Q8WTX9 485 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 ASB16Q96NS5 453 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 CITED4Q96RK1 184 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
SNHG1-219ENST00000542112 GRIP2Q9C0E4 1043 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 PSD3Q9NYI0 1048 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 ABCF2Q9UG63 623 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 RCAN3Q9UKA8 241 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 FHOD3Q2V2M9 1422 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 NCOA3Q9Y6Q9 1424 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 PLEKHH2Q8IVE3 1493 aa5.13□□□□□ -1.59
SNHG1-219ENST00000542112 MYO1CO00159 1063 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 TNFRSF10BO14763 440 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 BAG4O95429 457 aaKnown RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 TPM1P09493 284 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 HNRNPH2P55795 449 aaKnown RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 RWDD2BP57060 319 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 ADCY2Q08462 1091 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 BIRC2Q13490 618 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 NOLC1Q14978 699 aaKnown RBP eCLIP5.12□□□□□ -1.592e-19■■■■■ 32.2
SNHG1-219ENST00000542112 HIF1AQ16665 826 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 AP1ARQ63HQ0 302 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 DDX46Q7L014 1031 aaKnown RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 ARMCX6Q7L4S7 300 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 NPAS4Q8IUM7 802 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 EFCAB13Q8IY85 973 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 ALDH16A1Q8IZ83 802 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 RGL4Q8IZJ4 473 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 FAM177A1Q8N128 213 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 LINC00528Q8N1L1 170 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 GOLGA5Q8TBA6 731 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 PNISRQ8TF01 805 aaKnown RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 BORCS6Q96GS4 357 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 NGLY1Q96IV0 654 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 SIN3AQ96ST3 1273 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 SH3GL3Q99963 347 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 BCL2L13Q9BXK5 485 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 RBCK1Q9BYM8 510 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 POLMQ9NP87 494 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-219ENST00000542112 ETAA1Q9NY74 926 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 SYNPO2Q9UMS6 1093 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 SYNRGQ9UMZ2 1314 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 CASKIN1Q8WXD9 1431 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 FYCO1Q9BQS8 1478 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 CLASP1Q7Z460 1538 aa5.12□□□□□ -1.59
SNHG1-219ENST00000542112 SPATA31C2B4DYI2 1134 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 PPFIA2O75334 1257 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 EIF1AXP47813 144 aaKnown RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 BMS1Q14692 1282 aaKnown RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 ZRSR1Q15695 479 aaKnown RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 MAP9Q49MG5 647 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 WWC2Q6AWC2 1192 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 KLHL10Q6JEL2 608 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 MMS22LQ6ZRQ5 1243 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 FAM9BQ8IZU0 186 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF397Q8NF99 534 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 KIF18AQ8NI77 898 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 EXOC6Q8TAG9 804 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF428Q96B54 188 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 CHMP4CQ96CF2 233 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 KIF1BPQ96EK5 621 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 INSM2Q96T92 566 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 PHACTR1Q9C0D0 580 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 RANBP17Q9H2T7 1088 aaKnown RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 LRFN2Q9ULH4 789 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 HCN4Q9Y3Q4 1203 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 GPC6Q9Y625 555 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-219ENST00000542112 IL16Q14005 1332 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 SETD5Q9C0A6 1442 aa5.11□□□□□ -1.59
SNHG1-219ENST00000542112 KIF2AO00139 706 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-219ENST00000542112 BMP2P12643 396 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 TATP17735 454 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-219ENST00000542112 U2AF2P26368 475 aaKnown RBP eCLIP5.1□□□□□ -1.591e-8■■■□□ 19
SNHG1-219ENST00000542112 ABCD1P33897 745 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 KDRP35968 1356 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 PRPHP41219 470 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 PLA2G4AP47712 749 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 C4orf17Q53FE4 359 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 WDR44Q5JSH3 913 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 GJC2Q5T442 439 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-219ENST00000542112 C1QTNF12Q5T7M4 302 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 MAGI3Q5TCQ9 1506 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 SH3PXD2AQ5TCZ1 1133 aa5.1□□□□□ -1.59
SNHG1-219ENST00000542112 LEKR1Q6ZMV7 388 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms