RNA–Protein interactions for RNA: ENST00000541419.1

AC079949.1-201, humanhuman

TSL 3 BASIC

Gene AC079949.1, Length 505 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079949.1-201ENST00000541419 LAMB1P07942 1786 aa16.53■□□□□ 0.24
AC079949.1-201ENST00000541419 TRIOBPQ9H2D6 2365 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 UNCXA6NJT0 531 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 SNAP23O00161 211 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 CSF1RP07333 972 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 GJA5P36382 358 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 CASP7P55210 303 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 CAP1Q01518 475 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 CHRNDQ07001 517 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 CRHR2Q13324 411 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 ARMC5Q96C12 935 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 PRMT6Q96LA8 375 aaPredicted RBP16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.24
AC079949.1-201ENST00000541419 AOX1Q06278 1338 aa16.51■□□□□ 0.23
AC079949.1-201ENST00000541419 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
AC079949.1-201ENST00000541419 G2E3Q7L622 706 aa16.51■□□□□ 0.23
AC079949.1-201ENST00000541419 PTPN18Q99952 460 aa16.51■□□□□ 0.23
AC079949.1-201ENST00000541419 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
AC079949.1-201ENST00000541419 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 KCNJ4P48050 445 aa16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 GCKRQ14397 625 aa16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 CFAP100Q494V2 611 aa16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
AC079949.1-201ENST00000541419 SPDYE2BA6NHP3 402 aa16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 TAF5LO75529 589 aa16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 SPDYE6P0CI01 402 aa16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 SP3Q02447 781 aa16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
AC079949.1-201ENST00000541419 IL1R1P14778 569 aa16.48■□□□□ 0.23
AC079949.1-201ENST00000541419 IREB2P48200 963 aaKnown RBP16.48■□□□□ 0.23
AC079949.1-201ENST00000541419 FXR1P51114 621 aaKnown RBP eCLIP16.48■□□□□ 0.23
AC079949.1-201ENST00000541419 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
AC079949.1-201ENST00000541419 VEZTQ9HBM0 779 aa16.48■□□□□ 0.23
AC079949.1-201ENST00000541419 MYO1BO43795 1136 aa16.47■□□□□ 0.23
AC079949.1-201ENST00000541419 FKBP1AP62942 108 aaKnown RBP16.47■□□□□ 0.23
AC079949.1-201ENST00000541419 RASA3Q14644 834 aa16.47■□□□□ 0.23
AC079949.1-201ENST00000541419 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
AC079949.1-201ENST00000541419 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
AC079949.1-201ENST00000541419 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 TMEM106CQ9BVX2 250 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 JAG2Q9Y219 1238 aa16.46■□□□□ 0.23
AC079949.1-201ENST00000541419 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
AC079949.1-201ENST00000541419 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
AC079949.1-201ENST00000541419 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 ZNF804AQ7Z570 1209 aa16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 SZT2Q5T011 3432 aa16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 OTOFQ9HC10 1997 aa16.44■□□□□ 0.22
AC079949.1-201ENST00000541419 A0A1B0GUL6 1792 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 RBM5P52756 815 aaKnown RBP eCLIP16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 FOXO4P98177 505 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 FLIIQ13045 1269 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 TEPSINQ96N21 525 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
AC079949.1-201ENST00000541419 IFIT5Q13325 482 aaKnown RBP16.42■□□□□ 0.22
AC079949.1-201ENST00000541419 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
AC079949.1-201ENST00000541419 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
AC079949.1-201ENST00000541419 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
AC079949.1-201ENST00000541419 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 TAF1CQ15572 869 aaPredicted RBP16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
AC079949.1-201ENST00000541419 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 PLIN1O60240 522 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 CCL15Q16663 113 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 SERPINA10Q9UK55 444 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
AC079949.1-201ENST00000541419 RANBP2P49792 3224 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms