RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 PSMD1Q99460 953 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 HAUS7Q99871 368 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 IL25Q9H293 177 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 NDUFB9Q9Y6M9 179 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 C6orf229H3BNL8 230 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 HIP1O00291 1037 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 GORABQ5T7V8 394 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 BOLA2Q9H3K6 86 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 ANTXR1Q9H6X2 564 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 DIAPH3Q9NSV4 1193 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 SBF1O95248 1867 aa15.06■□□□□ 0
SMAD3-204ENST00000540846 RAD50Q92878 1312 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 NFKBIEO00221 500 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 UQCRFS1P1P0C7P4 283 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 MCCP23508 829 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 HIBADHP31937 336 aaKnown RBP15.05■□□□□ -0
SMAD3-204ENST00000540846 ANAPC15P60006 121 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 SOGA3Q5TF21 947 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 RTKN2Q8IZC4 609 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
SMAD3-204ENST00000540846 HMG20BQ9P0W2 317 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 BCS1LQ9Y276 419 aa15.05■□□□□ -0
SMAD3-204ENST00000540846 DICER1Q9UPY3 1922 aaKnown RBP15.05■□□□□ -0
SMAD3-204ENST00000540846 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
SMAD3-204ENST00000540846 TDRD7Q8NHU6 1098 aaKnown RBP15.04■□□□□ -0
SMAD3-204ENST00000540846 TMX4Q9H1E5 349 aaPredicted RBP15.04■□□□□ -0
SMAD3-204ENST00000540846 MAST2Q6P0Q8 1798 aa15.04■□□□□ -0
SMAD3-204ENST00000540846 PDS5AQ29RF7 1337 aaKnown RBP15.03■□□□□ -0
SMAD3-204ENST00000540846 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
SMAD3-204ENST00000540846 IL1R1P14778 569 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 ZAP70P43403 619 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
SMAD3-204ENST00000540846 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
SMAD3-204ENST00000540846 CD209Q9NNX6 404 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 SNRKQ9NRH2 765 aa15.03■□□□□ -0
SMAD3-204ENST00000540846 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
SMAD3-204ENST00000540846 SEMA3EO15041 775 aa15.02■□□□□ -0
SMAD3-204ENST00000540846 CYP2E1P05181 493 aaPredicted RBP15.02■□□□□ -0
SMAD3-204ENST00000540846 PRELPP51888 382 aa15.02■□□□□ -0
SMAD3-204ENST00000540846 WASHC4Q2M389 1173 aa15.02■□□□□ -0
SMAD3-204ENST00000540846 CWC27Q6UX04 472 aaKnown RBP15.02■□□□□ -0
SMAD3-204ENST00000540846 ZNF804AQ7Z570 1209 aa15.02■□□□□ -0
SMAD3-204ENST00000540846 SPATA5Q8NB90 893 aa15.02■□□□□ -0
SMAD3-204ENST00000540846 K7ELQ4 463 aaPredicted RBP15.02□□□□□ -0.01
SMAD3-204ENST00000540846 RIMBP2O15034 1052 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 YBX3P16989 372 aaKnown RBP eCLIP15.02□□□□□ -0.016e-6■□□□□ 10.6
SMAD3-204ENST00000540846 AOC3Q16853 763 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 SUPT20HQ8NEM7 779 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 EYA3Q99504 573 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 DNAJC2Q99543 621 aaKnown RBP15.02□□□□□ -0.01
SMAD3-204ENST00000540846 FSD1Q9BTV5 496 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 ZC3H12CQ9C0D7 883 aaKnown RBP15.02□□□□□ -0.01
SMAD3-204ENST00000540846 PAG1Q9NWQ8 432 aa15.02□□□□□ -0.01
SMAD3-204ENST00000540846 UTRNP46939 3433 aa15.01□□□□□ -0.01
SMAD3-204ENST00000540846 HSPA4P34932 840 aa15.01□□□□□ -0.01
SMAD3-204ENST00000540846 TICAM2Q86XR7 235 aa15.01□□□□□ -0.01
SMAD3-204ENST00000540846 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
SMAD3-204ENST00000540846 SLKQ9H2G2 1235 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-204ENST00000540846 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
SMAD3-204ENST00000540846 GOLIM4O00461 696 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 ST18O60284 1047 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 NMIQ13287 307 aaPredicted RBP15□□□□□ -0.01
SMAD3-204ENST00000540846 KIAA1211Q6ZU35 1233 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 VPS37DQ86XT2 251 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 KBTBD3Q8NAB2 608 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 IL27Q8NEV9 243 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 TAOK3Q9H2K8 898 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 PIH1D3Q9NQM4 214 aaKnown RBP15□□□□□ -0.01
SMAD3-204ENST00000540846 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
SMAD3-204ENST00000540846 GNL3LQ9NVN8 582 aaKnown RBP15□□□□□ -0.01
SMAD3-204ENST00000540846 DENND2AQ9ULE3 1009 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
SMAD3-204ENST00000540846 RASSF7Q02833 373 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 DOK7Q18PE1 504 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 VPS33BQ9H267 617 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 CCDC171Q6TFL3 1326 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 SALL1Q9NSC2 1324 aa14.99□□□□□ -0.01
SMAD3-204ENST00000540846 A0A0D9SFI3 127 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 DDIT3P35638 169 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 FAM227BQ96M60 508 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 DBNDD1Q9H9R9 158 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 YDJCA8MPS7 323 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 ECE2O60344 883 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 CHGBP05060 677 aa14.98□□□□□ -0.01
SMAD3-204ENST00000540846 IARSP41252 1262 aaKnown RBP14.98□□□□□ -0.01
SMAD3-204ENST00000540846 NBR1Q14596 966 aa14.97□□□□□ -0.01
SMAD3-204ENST00000540846 PODNQ7Z5L7 613 aa14.97□□□□□ -0.01
SMAD3-204ENST00000540846 ZNF384Q8TF68 577 aa14.97□□□□□ -0.01
SMAD3-204ENST00000540846 KCNQ5Q9NR82 932 aa14.97□□□□□ -0.01
SMAD3-204ENST00000540846 ADAMTSL1Q8N6G6 1762 aa14.97□□□□□ -0.01
SMAD3-204ENST00000540846 GRIK5Q16478 980 aa14.96□□□□□ -0.01
SMAD3-204ENST00000540846 KCNB2Q92953 911 aa14.96□□□□□ -0.01
SMAD3-204ENST00000540846 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms