RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CCNL1Q9UK58 526 aaPredicted RBP33.72■■■□□ 2.99
SAMD1-202ENST00000533683 CNPY2Q9Y2B0 182 aa33.72■■■□□ 2.99
SAMD1-202ENST00000533683 IMMTQ16891 758 aaKnown RBP33.72■■■□□ 2.99
SAMD1-202ENST00000533683 TMEM87AQ8NBN3 555 aa33.72■■■□□ 2.99
SAMD1-202ENST00000533683 PDIA4P13667 645 aaKnown RBP33.71■■■□□ 2.99
SAMD1-202ENST00000533683 PDCP20941 246 aa33.71■■■□□ 2.99
SAMD1-202ENST00000533683 SF3B3Q15393 1217 aaKnown RBP33.71■■■□□ 2.99
SAMD1-202ENST00000533683 TMEM63CQ9P1W3 806 aa33.71■■■□□ 2.99
SAMD1-202ENST00000533683 GNPATO15228 680 aa33.71■■■□□ 2.99
SAMD1-202ENST00000533683 PDE6AP16499 860 aa33.71■■■□□ 2.99
SAMD1-202ENST00000533683 SRP68Q9UHB9 627 aaKnown RBP33.71■■■□□ 2.99
SAMD1-202ENST00000533683 WWC3Q9ULE0 1092 aa33.71■■■□□ 2.99
SAMD1-202ENST00000533683 ZNF532Q9HCE3 1301 aa33.7■■■□□ 2.99
SAMD1-202ENST00000533683 HAND2P61296 217 aa33.7■■■□□ 2.99
SAMD1-202ENST00000533683 GADD45BO75293 160 aaPredicted RBP33.7■■■□□ 2.98
SAMD1-202ENST00000533683 TCRBV5S4A2TA0A5A2 114 aa33.69■■■□□ 2.98
SAMD1-202ENST00000533683 BCAMP50895 628 aa33.68■■■□□ 2.98
SAMD1-202ENST00000533683 SCRN1Q12765 414 aa33.68■■■□□ 2.98
SAMD1-202ENST00000533683 PFKFB2O60825 505 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 APOBRQ0VD83 1088 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 SLC10A5Q5PT55 438 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 CHST3Q7LGC8 479 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 CERKQ8TCT0 537 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 AFF2P51816 1311 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 CASZ1Q86V15 1759 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 JAK2O60674 1132 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 GTF2E1P29083 439 aaPredicted RBP33.67■■■□□ 2.98
SAMD1-202ENST00000533683 CDC37L1Q7L3B6 337 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 ANKRD18AQ8IVF6 992 aa33.67■■■□□ 2.98
SAMD1-202ENST00000533683 TAF1P21675 1872 aa33.66■■■□□ 2.98
SAMD1-202ENST00000533683 HSPA1LP34931 641 aa33.65■■■□□ 2.98
SAMD1-202ENST00000533683 AMIGO3Q86WK7 504 aa33.65■■■□□ 2.98
SAMD1-202ENST00000533683 RTCBQ9Y3I0 505 aaKnown RBP33.65■■■□□ 2.98
SAMD1-202ENST00000533683 ZPR1O75312 459 aa33.65■■■□□ 2.98
SAMD1-202ENST00000533683 SETDB2Q96T68 719 aa33.65■■■□□ 2.98
SAMD1-202ENST00000533683 DOCK2Q92608 1830 aa33.64■■■□□ 2.98
SAMD1-202ENST00000533683 PRKCSHP14314 528 aaPredicted RBP33.64■■■□□ 2.98
SAMD1-202ENST00000533683 DNM1Q05193 864 aaKnown RBP33.64■■■□□ 2.98
SAMD1-202ENST00000533683 ZNF213O14771 459 aa33.64■■■□□ 2.98
SAMD1-202ENST00000533683 FBXL16Q8N461 479 aa33.64■■■□□ 2.98
SAMD1-202ENST00000533683 LY75O60449 1722 aa33.64■■■□□ 2.98
SAMD1-202ENST00000533683 SBF2Q86WG5 1849 aa33.64■■■□□ 2.98
SAMD1-202ENST00000533683 ONECUT3O60422 494 aaPredicted RBP33.63■■■□□ 2.97
SAMD1-202ENST00000533683 NYXQ9GZU5 481 aa33.63■■■□□ 2.97
SAMD1-202ENST00000533683 BSDC1Q9NW68 430 aaPredicted RBP33.63■■■□□ 2.97
SAMD1-202ENST00000533683 TAF1LQ8IZX4 1826 aa33.63■■■□□ 2.97
SAMD1-202ENST00000533683 MAP3K12Q12852 859 aa33.62■■■□□ 2.97
SAMD1-202ENST00000533683 ARHGEF1Q92888 912 aaKnown RBP33.62■■■□□ 2.97
SAMD1-202ENST00000533683 LLPHQ9BRT6 129 aaKnown RBP33.62■■■□□ 2.97
SAMD1-202ENST00000533683 FIBPO43427 364 aa33.61■■■□□ 2.97
SAMD1-202ENST00000533683 MAGEB6Q8N7X4 407 aa33.61■■■□□ 2.97
SAMD1-202ENST00000533683 FERMT3Q86UX7 667 aa33.61■■■□□ 2.97
SAMD1-202ENST00000533683 MB21D2Q8IYB1 491 aaPredicted RBP33.61■■■□□ 2.97
SAMD1-202ENST00000533683 SMARCC2Q8TAQ2 1214 aa33.61■■■□□ 2.97
SAMD1-202ENST00000533683 STRBPQ96SI9 672 aaKnown RBP33.61■■■□□ 2.97
SAMD1-202ENST00000533683 NBPF5PQ86XG9 351 aaPredicted RBP33.6■■■□□ 2.97
SAMD1-202ENST00000533683 AIDAQ96BJ3 306 aa33.6■■■□□ 2.97
SAMD1-202ENST00000533683 ZNF274Q96GC6 653 aaPredicted RBP33.6■■■□□ 2.97
SAMD1-202ENST00000533683 COL24A1Q17RW2 1714 aa33.6■■■□□ 2.97
SAMD1-202ENST00000533683 A0A1B0GUL6 1792 aa33.6■■■□□ 2.97
SAMD1-202ENST00000533683 CELF1Q92879 486 aaKnown RBP33.6■■■□□ 2.97
SAMD1-202ENST00000533683 PDIA3P30101 505 aaKnown RBP33.59■■■□□ 2.97
SAMD1-202ENST00000533683 SEPT12Q8IYM1 358 aa33.59■■■□□ 2.97
SAMD1-202ENST00000533683 NCOA7Q8NI08 942 aa33.59■■■□□ 2.97
SAMD1-202ENST00000533683 NBPF3Q9H094 633 aa33.59■■■□□ 2.97
SAMD1-202ENST00000533683 APPP05067 770 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 NSUN7Q8NE18 718 aaKnown RBP33.58■■■□□ 2.97
SAMD1-202ENST00000533683 DDX11Q96FC9 970 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 GPHNQ9NQX3 736 aaPredicted RBP33.58■■■□□ 2.97
SAMD1-202ENST00000533683 MINPP1Q9UNW1 487 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 WTIPA6NIX2 430 aaPredicted RBP33.58■■■□□ 2.97
SAMD1-202ENST00000533683 CTDNEP1O95476 244 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 MCM5P33992 734 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 EVCP57679 992 aa33.58■■■□□ 2.97
SAMD1-202ENST00000533683 CCT2P78371 535 aaKnown RBP33.58■■■□□ 2.97
SAMD1-202ENST00000533683 TRPC5Q9UL62 973 aaPredicted RBP33.58■■■□□ 2.97
SAMD1-202ENST00000533683 SYCE3A1L190 88 aa33.57■■■□□ 2.96
SAMD1-202ENST00000533683 UBE2HP62256 183 aa33.57■■■□□ 2.96
SAMD1-202ENST00000533683 UBE4AQ14139 1066 aa33.57■■■□□ 2.96
SAMD1-202ENST00000533683 PRC1O43663 620 aa33.57■■■□□ 2.96
SAMD1-202ENST00000533683 NLRP3Q96P20 1036 aa33.57■■■□□ 2.96
SAMD1-202ENST00000533683 ZNF804BA4D1E1 1349 aa33.56■■■□□ 2.96
SAMD1-202ENST00000533683 RALYLQ86SE5 291 aaKnown RBP33.56■■■□□ 2.96
SAMD1-202ENST00000533683 NCOA5Q9HCD5 579 aaKnown RBP33.56■■■□□ 2.96
SAMD1-202ENST00000533683 NAP1L2Q9ULW6 460 aaPredicted RBP33.56■■■□□ 2.96
SAMD1-202ENST00000533683 ANTXR2P58335 489 aa33.55■■■□□ 2.96
SAMD1-202ENST00000533683 CSPP1Q1MSJ5 1256 aa33.55■■■□□ 2.96
SAMD1-202ENST00000533683 TPTE2Q6XPS3 522 aa33.55■■■□□ 2.96
SAMD1-202ENST00000533683 SYAP1Q96A49 352 aaPredicted RBP33.55■■■□□ 2.96
SAMD1-202ENST00000533683 IQSEC3Q9UPP2 1182 aaPredicted RBP33.55■■■□□ 2.96
SAMD1-202ENST00000533683 C4BP0C0L5 1744 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 MBD4O95243 580 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 GYG1P46976 350 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 FAM173BQ6P4H8 233 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 LRSAM1Q6UWE0 723 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 ALX1Q15699 326 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 TBC1D10CQ8IV04 446 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 CCDC24Q8N4L8 307 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 FAM184AQ8NB25 1140 aa33.54■■■□□ 2.96
SAMD1-202ENST00000533683 PTPDC1A2A3K4 754 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms