RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 NFIXQ14938 502 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 SH3D19Q5HYK7 790 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 USPL1Q5W0Q7 1092 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
POLB-216ENST00000530566 INSRP06213 1382 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 H3BM21 787 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 FSHRP23945 695 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 CRKLP46109 303 aaKnown RBP10.67□□□□□ -0.7
POLB-216ENST00000530566 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 GPC2Q8N158 579 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 SPG7Q9UQ90 795 aa10.67□□□□□ -0.7
POLB-216ENST00000530566 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 PDE6BP35913 854 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 LCE2CQ5TA81 110 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 CARD14Q9BXL6 1004 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 KDM4CQ9H3R0 1056 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 HDAC9Q9UKV0 1011 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 EMILIN1Q9Y6C2 1016 aa10.66□□□□□ -0.7
POLB-216ENST00000530566 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
POLB-216ENST00000530566 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.7
POLB-216ENST00000530566 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.7
POLB-216ENST00000530566 MAN1A2O60476 641 aa10.65□□□□□ -0.7
POLB-216ENST00000530566 PDXDC2PQ6P474 469 aa10.65□□□□□ -0.7
POLB-216ENST00000530566 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.7
POLB-216ENST00000530566 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
POLB-216ENST00000530566 ZNF408Q9H9D4 720 aa10.65□□□□□ -0.7
POLB-216ENST00000530566 CDV3Q9UKY7 258 aaKnown RBP10.65□□□□□ -0.7
POLB-216ENST00000530566 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 BMP2P12643 396 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 FBLN1P23142 703 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
POLB-216ENST00000530566 CCDC116Q8IYX3 515 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 MEIOBQ8N635 442 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 CNKSR1Q969H4 720 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 FKBPLQ9UIM3 349 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 GJA3Q9Y6H8 435 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
POLB-216ENST00000530566 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
POLB-216ENST00000530566 PRPF40BQ6NWY9 871 aaKnown RBP10.63□□□□□ -0.71
POLB-216ENST00000530566 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
POLB-216ENST00000530566 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
POLB-216ENST00000530566 COG3Q96JB2 828 aa10.63□□□□□ -0.71
POLB-216ENST00000530566 ARHGAP9Q9BRR9 750 aa10.63□□□□□ -0.71
POLB-216ENST00000530566 ZNF277Q9NRM2 450 aaPredicted RBP10.63□□□□□ -0.71
POLB-216ENST00000530566 EDC4Q6P2E9 1401 aaKnown RBP10.63□□□□□ -0.71
POLB-216ENST00000530566 MYH14Q7Z406 1995 aaKnown RBP10.63□□□□□ -0.71
POLB-216ENST00000530566 FZD9O00144 591 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 GMPRP36959 345 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 EPS15P42566 896 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 HUNKP57058 714 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 CCDC93Q567U6 631 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 PPP2R2DQ66LE6 453 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 FBXO46Q6PJ61 603 aaPredicted RBP10.62□□□□□ -0.71
POLB-216ENST00000530566 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
POLB-216ENST00000530566 BRIP1Q9BX63 1249 aa10.62□□□□□ -0.71
POLB-216ENST00000530566 COL25A1Q9BXS0 654 aaPredicted RBP10.62□□□□□ -0.71
POLB-216ENST00000530566 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
POLB-216ENST00000530566 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
POLB-216ENST00000530566 ZBTB33Q86T24 672 aa10.61□□□□□ -0.71
POLB-216ENST00000530566 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
POLB-216ENST00000530566 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
POLB-216ENST00000530566 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
POLB-216ENST00000530566 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
POLB-216ENST00000530566 PHKG2P15735 406 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 EIF6P56537 245 aaKnown RBP10.6□□□□□ -0.71
POLB-216ENST00000530566 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 LRRN4Q8WUT4 740 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 JDP2Q8WYK2 163 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 GLIS2Q9BZE0 524 aaPredicted RBP10.6□□□□□ -0.71
POLB-216ENST00000530566 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 NARFQ9UHQ1 456 aa10.6□□□□□ -0.71
POLB-216ENST00000530566 FAM155AB1AL88 458 aaPredicted RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 SCNN1DP51172 638 aa10.59□□□□□ -0.71
POLB-216ENST00000530566 PTK2Q05397 1052 aa10.59□□□□□ -0.71
POLB-216ENST00000530566 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 RGMBQ6NW40 437 aa10.59□□□□□ -0.71
POLB-216ENST00000530566 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
POLB-216ENST00000530566 TERF2IPQ9NYB0 399 aa10.59□□□□□ -0.71
POLB-216ENST00000530566 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
POLB-216ENST00000530566 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
POLB-216ENST00000530566 ERVV-2B6SEH9 535 aa10.58□□□□□ -0.72
POLB-216ENST00000530566 AP1G2O75843 785 aa10.58□□□□□ -0.72
POLB-216ENST00000530566 INTS3Q68E01 1043 aaKnown RBP10.58□□□□□ -0.72
POLB-216ENST00000530566 ZNF296Q8WUU4 475 aaPredicted RBP10.58□□□□□ -0.72
POLB-216ENST00000530566 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
POLB-216ENST00000530566 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
POLB-216ENST00000530566 TRIOBPQ9H2D6 2365 aa10.58□□□□□ -0.72
POLB-216ENST00000530566 SOBPA7XYQ1 873 aa10.57□□□□□ -0.72
POLB-216ENST00000530566 H0YGN5 161 aa10.57□□□□□ -0.72
POLB-216ENST00000530566 ZNF157P51786 506 aaPredicted RBP10.57□□□□□ -0.72
POLB-216ENST00000530566 NR6A1Q15406 480 aa10.57□□□□□ -0.72
POLB-216ENST00000530566 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms