RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 ZAP70P43403 619 aa9.96□□□□□ -0.82
PABPC4-223ENST00000529216 TTF1Q15361 905 aaPredicted RBP9.96□□□□□ -0.82
PABPC4-223ENST00000529216 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
PABPC4-223ENST00000529216 PODNQ7Z5L7 613 aa9.96□□□□□ -0.82
PABPC4-223ENST00000529216 ZNF277Q9NRM2 450 aaPredicted RBP9.96□□□□□ -0.82
PABPC4-223ENST00000529216 SALL1Q9NSC2 1324 aa9.96□□□□□ -0.82
PABPC4-223ENST00000529216 TRIM6-TRIM34B2RNG4 842 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 G3V3G9 751 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 GOLIM4O00461 696 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 ECE2O60344 883 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 IGSF3O75054 1194 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 CYP2E1P05181 493 aaPredicted RBP9.95□□□□□ -0.82
PABPC4-223ENST00000529216 RASSF7Q02833 373 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 LARGE2Q8N3Y3 721 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 ZGPATQ8N5A5 531 aaKnown RBP9.95□□□□□ -0.82
PABPC4-223ENST00000529216 KBTBD3Q8NAB2 608 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 WDR66Q8TBY9 1149 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 IQSEC3Q9UPP2 1182 aaPredicted RBP9.95□□□□□ -0.82
PABPC4-223ENST00000529216 FAM205AQ6ZU69 1335 aa9.95□□□□□ -0.82
PABPC4-223ENST00000529216 COL4A5P29400 1685 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 MAP4K4O95819 1239 aaPredicted RBP9.94□□□□□ -0.82
PABPC4-223ENST00000529216 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
PABPC4-223ENST00000529216 TMED8Q6PL24 325 aaPredicted RBP9.94□□□□□ -0.82
PABPC4-223ENST00000529216 NIM1KQ8IY84 436 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 TBC1D22AQ8WUA7 517 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 RILPL2Q969X0 211 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 EDC3Q96F86 508 aaKnown RBP9.94□□□□□ -0.82
PABPC4-223ENST00000529216 FSD1Q9BTV5 496 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 DBNDD1Q9H9R9 158 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 NDUFB9Q9Y6M9 179 aa9.94□□□□□ -0.82
PABPC4-223ENST00000529216 FER1L6Q2WGJ9 1857 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 HIP1O00291 1037 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 CDC45O75419 566 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 LMNB1P20700 586 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 FKBP1AP62942 108 aaKnown RBP9.93□□□□□ -0.82
PABPC4-223ENST00000529216 CHAF1AQ13111 956 aaPredicted RBP9.93□□□□□ -0.82
PABPC4-223ENST00000529216 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 PELP1Q8IZL8 1130 aaKnown RBP9.93□□□□□ -0.82
PABPC4-223ENST00000529216 JDP2Q8WYK2 163 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.93□□□□□ -0.829e-7■□□□□ 9.1
PABPC4-223ENST00000529216 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 PIH1D3Q9NQM4 214 aaKnown RBP9.93□□□□□ -0.82
PABPC4-223ENST00000529216 ZNRF3Q9ULT6 936 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 SUGT1Q9Y2Z0 365 aa9.93□□□□□ -0.82
PABPC4-223ENST00000529216 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 YDJCA8MPS7 323 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
PABPC4-223ENST00000529216 PRELPP51888 382 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 GTF2IP78347 998 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 GPR162Q16538 588 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
PABPC4-223ENST00000529216 ZSCAN25Q6NSZ9 544 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
PABPC4-223ENST00000529216 MYO3BQ8WXR4 1341 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 IDH1O75874 414 aaKnown RBP9.91□□□□□ -0.82
PABPC4-223ENST00000529216 CHMLP26374 656 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 PRDX5P30044 214 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 DACT2Q5SW24 774 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 TBC1D9Q6ZT07 1266 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 DIAPH3Q9NSV4 1193 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 ABCF2Q9UG63 623 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
PABPC4-223ENST00000529216 MAST3O60307 1309 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 RAD50Q92878 1312 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 FZD9O00144 591 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
PABPC4-223ENST00000529216 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
PABPC4-223ENST00000529216 PDE6AP16499 860 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 ADD2P35612 726 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 UBE3CQ15386 1083 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 C8orf34Q49A92 452 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 SLC9C2Q5TAH2 1124 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 KCNQ5Q9NR82 932 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 JAG2Q9Y219 1238 aa9.9□□□□□ -0.82
PABPC4-223ENST00000529216 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
PABPC4-223ENST00000529216 MAST2Q6P0Q8 1798 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 TCRBV5S4A2TA0A5A2 114 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 PSMD14O00487 310 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 EIF5BO60841 1220 aaKnown RBP9.89□□□□□ -0.83
PABPC4-223ENST00000529216 RAD17O75943 681 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 VIL1P09327 827 aaKnown RBP9.89□□□□□ -0.83
PABPC4-223ENST00000529216 EIF6P56537 245 aaKnown RBP9.89□□□□□ -0.83
PABPC4-223ENST00000529216 GSTO1P78417 241 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 MECOMQ03112 1051 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 TNIP1Q15025 636 aa9.89□□□□□ -0.83
PABPC4-223ENST00000529216 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms