RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 EIF4G2P78344 907 aaKnown RBP eCLIP8.65□□□□□ -1.02
CSTF3-207ENST00000526480 NFIXQ14938 502 aa8.65□□□□□ -1.02
CSTF3-207ENST00000526480 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
CSTF3-207ENST00000526480 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
CSTF3-207ENST00000526480 TTC28Q96AY4 2481 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
CSTF3-207ENST00000526480 SLC19A1P41440 591 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 SEMA3FQ13275 785 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 USPL1Q5W0Q7 1092 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 SYNE4Q8N205 404 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.035e-17■■□□□ 12.5
CSTF3-207ENST00000526480 HHIPL1Q96JK4 782 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 RNF186Q9NXI6 227 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 SAGE1Q9NXZ1 904 aa8.64□□□□□ -1.03
CSTF3-207ENST00000526480 CACNA1AO00555 2505 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
CSTF3-207ENST00000526480 CRKLP46109 303 aaKnown RBP8.63□□□□□ -1.03
CSTF3-207ENST00000526480 PTK2Q05397 1052 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 NOGQ13253 232 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 NEUROD1Q13562 356 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 RAPGEFL1Q9UHV5 662 aa8.63□□□□□ -1.03
CSTF3-207ENST00000526480 V9GY48 417 aaPredicted RBP8.63□□□□□ -1.03
CSTF3-207ENST00000526480 TONSLQ96HA7 1378 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 EVC2Q86UK5 1308 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 SERPINB2P05120 415 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 EPS15P42566 896 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 OCSTAMPQ9BR26 566 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
CSTF3-207ENST00000526480 ZNF277Q9NRM2 450 aaPredicted RBP8.62□□□□□ -1.03
CSTF3-207ENST00000526480 NCAPD2Q15021 1401 aa8.62□□□□□ -1.03
CSTF3-207ENST00000526480 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
CSTF3-207ENST00000526480 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 H0YGN5 161 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 SCNN1DP51172 638 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
CSTF3-207ENST00000526480 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
CSTF3-207ENST00000526480 OLFM4Q6UX06 510 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
CSTF3-207ENST00000526480 FZD9O00144 591 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 AMPHP49418 695 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 PLA2G2CQ5R387 149 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 INTS5Q6P9B9 1019 aaKnown RBP8.6□□□□□ -1.03
CSTF3-207ENST00000526480 DLK2Q6UY11 383 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 SH3BP5LQ7L8J4 393 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 GPC2Q8N158 579 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 ZNF408Q9H9D4 720 aa8.6□□□□□ -1.03
CSTF3-207ENST00000526480 KDM3BQ7LBC6 1761 aa8.59□□□□□ -1.03
CSTF3-207ENST00000526480 SOX1O00570 391 aaPredicted RBP8.59□□□□□ -1.03
CSTF3-207ENST00000526480 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
CSTF3-207ENST00000526480 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
CSTF3-207ENST00000526480 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
CSTF3-207ENST00000526480 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
CSTF3-207ENST00000526480 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
CSTF3-207ENST00000526480 KIF20BQ96Q89 1820 aa8.59□□□□□ -1.03
CSTF3-207ENST00000526480 SNED1Q8TER0 1413 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
CSTF3-207ENST00000526480 HUNKP57058 714 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
CSTF3-207ENST00000526480 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
CSTF3-207ENST00000526480 ZNF296Q8WUU4 475 aaPredicted RBP8.58□□□□□ -1.04
CSTF3-207ENST00000526480 C7orf43Q8WVR3 580 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 BAP1Q92560 729 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 GJA3Q9Y6H8 435 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
CSTF3-207ENST00000526480 SOS1Q07889 1333 aaPredicted RBP8.57□□□□□ -1.04
CSTF3-207ENST00000526480 EN2P19622 333 aaPredicted RBP8.57□□□□□ -1.04
CSTF3-207ENST00000526480 RPIAP49247 311 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 FKBP4Q02790 459 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSTF3-207ENST00000526480 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 ZNF511Q8NB15 262 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
CSTF3-207ENST00000526480 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
CSTF3-207ENST00000526480 PHKG2P15735 406 aa8.56□□□□□ -1.04
CSTF3-207ENST00000526480 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
CSTF3-207ENST00000526480 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
CSTF3-207ENST00000526480 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
CSTF3-207ENST00000526480 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
CSTF3-207ENST00000526480 PCDHB9Q9Y5E1 797 aa8.56□□□□□ -1.04
CSTF3-207ENST00000526480 COL15A1P39059 1388 aa8.56□□□□□ -1.04
CSTF3-207ENST00000526480 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
CSTF3-207ENST00000526480 IARSP41252 1262 aaKnown RBP8.55□□□□□ -1.04
CSTF3-207ENST00000526480 CCDC93Q567U6 631 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 HSP90AB2PQ58FF8 381 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 PRR5LQ6MZQ0 368 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 RGMBQ6NW40 437 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 USP50Q70EL3 339 aaPredicted RBP8.55□□□□□ -1.04
CSTF3-207ENST00000526480 ZBTB33Q86T24 672 aa8.55□□□□□ -1.04
CSTF3-207ENST00000526480 ZNF598Q86UK7 904 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms