RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ZIC5Q96T25 663 aa15.56■□□□□ 0.08
VEGFA-223ENST00000523125 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
VEGFA-223ENST00000523125 MYH13Q9UKX3 1938 aa15.56■□□□□ 0.08
VEGFA-223ENST00000523125 AKAP11Q9UKA4 1901 aa15.55■□□□□ 0.08
VEGFA-223ENST00000523125 GYG1P46976 350 aa15.55■□□□□ 0.08
VEGFA-223ENST00000523125 RFX5P48382 616 aaPredicted RBP15.55■□□□□ 0.08
VEGFA-223ENST00000523125 FKBP1AP62942 108 aaKnown RBP15.55■□□□□ 0.08
VEGFA-223ENST00000523125 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
VEGFA-223ENST00000523125 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
VEGFA-223ENST00000523125 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 HIBADHP31937 336 aaKnown RBP15.54■□□□□ 0.08
VEGFA-223ENST00000523125 PRAMEF18Q5VWM3 479 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 RGMBQ6NW40 437 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 MTMR14Q8NCE2 650 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 JAG2Q9Y219 1238 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 PCDHAC2Q9Y5I4 1007 aa15.54■□□□□ 0.08
VEGFA-223ENST00000523125 CASP8AP2Q9UKL3 1982 aa15.53■□□□□ 0.08
VEGFA-223ENST00000523125 PDE8BO95263 885 aa15.53■□□□□ 0.08
VEGFA-223ENST00000523125 NOGQ13253 232 aa15.53■□□□□ 0.08
VEGFA-223ENST00000523125 FBXO33Q7Z6M2 555 aa15.53■□□□□ 0.08
VEGFA-223ENST00000523125 API5Q9BZZ5 524 aaKnown RBP15.53■□□□□ 0.08
VEGFA-223ENST00000523125 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.08
VEGFA-223ENST00000523125 METTL24Q5JXM2 366 aa15.52■□□□□ 0.08
VEGFA-223ENST00000523125 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.08
VEGFA-223ENST00000523125 AOX1Q06278 1338 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 F8W031 263 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-223ENST00000523125 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-223ENST00000523125 ZNF157P51786 506 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-223ENST00000523125 FKBP1BP68106 108 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 DLGAP5Q15398 846 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 MOB2Q70IA6 237 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 ATG9AQ7Z3C6 839 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 CCDC102AQ96A19 550 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 BEGAINQ9BUH8 593 aa15.51■□□□□ 0.07
VEGFA-223ENST00000523125 KIF16BQ96L93 1317 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 EYA2O00167 538 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 SLC10A3P09131 477 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 FGFR2P21802 821 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 CFAP100Q494V2 611 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 MFSD14BQ5SR56 506 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
VEGFA-223ENST00000523125 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
VEGFA-223ENST00000523125 PRMT6Q96LA8 375 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-223ENST00000523125 MEIS3Q99687 375 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 TSKSQ9UJT2 592 aa15.5■□□□□ 0.07
VEGFA-223ENST00000523125 SPDYE2BA6NHP3 402 aa15.49■□□□□ 0.07
VEGFA-223ENST00000523125 UBE2Q2LH0YL09 131 aa15.49■□□□□ 0.07
VEGFA-223ENST00000523125 BCAR3O75815 825 aa15.49■□□□□ 0.07
VEGFA-223ENST00000523125 SPDYE6P0CI01 402 aa15.49■□□□□ 0.07
VEGFA-223ENST00000523125 KIF23Q02241 960 aaPredicted RBP15.49■□□□□ 0.07
VEGFA-223ENST00000523125 IQSEC3Q9UPP2 1182 aaPredicted RBP15.49■□□□□ 0.07
VEGFA-223ENST00000523125 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
VEGFA-223ENST00000523125 LRRFIP2Q9Y608 721 aaKnown RBP15.49■□□□□ 0.07
VEGFA-223ENST00000523125 COL1A1P02452 1464 aaPredicted RBP15.48■□□□□ 0.07
VEGFA-223ENST00000523125 CA12O43570 354 aa15.48■□□□□ 0.07
VEGFA-223ENST00000523125 BCAMP50895 628 aa15.48■□□□□ 0.07
VEGFA-223ENST00000523125 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■□□□□ 10.9
VEGFA-223ENST00000523125 GRIK5Q16478 980 aa15.48■□□□□ 0.07
VEGFA-223ENST00000523125 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
VEGFA-223ENST00000523125 LAMB1P07942 1786 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 SSC5DA1L4H1 1573 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 TRIM27P14373 513 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
VEGFA-223ENST00000523125 CAVIN4Q5BKX8 364 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 VPS37DQ86XT2 251 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 DEFB129Q9H1M3 183 aa15.47■□□□□ 0.07
VEGFA-223ENST00000523125 TTF2Q9UNY4 1162 aaKnown RBP15.47■□□□□ 0.07
VEGFA-223ENST00000523125 CLRN2A0PK11 232 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 CIAO1O76071 339 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 CSRNP1Q96S65 589 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 SIL1Q9H173 461 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
VEGFA-223ENST00000523125 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
VEGFA-223ENST00000523125 MYO1BO43795 1136 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 CAPN15O75808 1086 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
VEGFA-223ENST00000523125 NF2P35240 595 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 RBM5P52756 815 aaKnown RBP eCLIP15.45■□□□□ 0.061e-9■□□□□ 9.1
VEGFA-223ENST00000523125 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-223ENST00000523125 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 LPIN2Q92539 896 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 PA2G4Q9UQ80 394 aaKnown RBP15.45■□□□□ 0.06
VEGFA-223ENST00000523125 HDAC5Q9UQL6 1122 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 OTOFQ9HC10 1997 aa15.45■□□□□ 0.06
VEGFA-223ENST00000523125 GNAI3P08754 354 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 CRKP46108 304 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 PRKG1Q13976 671 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-223ENST00000523125 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 DZIP1LQ8IYY4 767 aaKnown RBP15.44■□□□□ 0.06
VEGFA-223ENST00000523125 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-223ENST00000523125 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 PPP2R3BQ9Y5P8 575 aa15.44■□□□□ 0.06
VEGFA-223ENST00000523125 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-223ENST00000523125 SLC5A1P13866 664 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 MTX1Q13505 466 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms