RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ANGEL1Q9UNK9 670 aaKnown RBP18.91■□□□□ 0.62
PRKDC-204ENST00000521331 PDE4DIPQ5VU43 2346 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 SNAP23O00161 211 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 MYO1BO43795 1136 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 ALDH1A1P00352 501 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 EXOSC9Q06265 439 aaKnown RBP18.9■□□□□ 0.62
PRKDC-204ENST00000521331 MAP3K11Q16584 847 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 SPRYD7Q5W111 196 aa18.9■□□□□ 0.62
PRKDC-204ENST00000521331 UNCXA6NJT0 531 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 F6X3S4 739 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 PPP1R12BO60237 982 aaPredicted RBP18.89■□□□□ 0.61
PRKDC-204ENST00000521331 INHBEP58166 350 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 LMBR1LQ6UX01 489 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 SLC10A4Q96EP9 437 aa18.89■□□□□ 0.61
PRKDC-204ENST00000521331 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 MANSC4A6NHS7 340 aaPredicted RBP18.88■□□□□ 0.61
PRKDC-204ENST00000521331 GRM8O00222 908 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 FKTNO75072 461 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 SUPT20HL1Q3ZLR7 823 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 CFAP100Q494V2 611 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
PRKDC-204ENST00000521331 SALL2Q9Y467 1007 aaPredicted RBP18.88■□□□□ 0.61
PRKDC-204ENST00000521331 F8W031 263 aaPredicted RBP18.87■□□□□ 0.61
PRKDC-204ENST00000521331 ZBTB48P10074 688 aaPredicted RBP18.87■□□□□ 0.61
PRKDC-204ENST00000521331 FBXO46Q6PJ61 603 aaPredicted RBP18.87■□□□□ 0.61
PRKDC-204ENST00000521331 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
PRKDC-204ENST00000521331 C9orf78Q9NZ63 289 aaPredicted RBP18.86■□□□□ 0.61
PRKDC-204ENST00000521331 CACNA1FO60840 1977 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 ANP32CO43423 234 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 ALDH1L1O75891 902 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 ZNF594Q96JF6 807 aaPredicted RBP18.85■□□□□ 0.61
PRKDC-204ENST00000521331 PRMT6Q96LA8 375 aaPredicted RBP18.85■□□□□ 0.61
PRKDC-204ENST00000521331 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 FZD1Q9UP38 647 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 PCDHAC2Q9Y5I4 1007 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
PRKDC-204ENST00000521331 FAM205AQ6ZU69 1335 aa18.84■□□□□ 0.61
PRKDC-204ENST00000521331 PLIN1O60240 522 aa18.84■□□□□ 0.61
PRKDC-204ENST00000521331 IREB2P48200 963 aaKnown RBP18.84■□□□□ 0.61
PRKDC-204ENST00000521331 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRKDC-204ENST00000521331 IFNL1Q8IU54 200 aa18.84■□□□□ 0.61
PRKDC-204ENST00000521331 WNK4Q96J92 1243 aa18.84■□□□□ 0.61
PRKDC-204ENST00000521331 R3HDMLQ9H3Y0 253 aa18.84■□□□□ 0.61
PRKDC-204ENST00000521331 TNFAIP1Q13829 316 aa18.83■□□□□ 0.6
PRKDC-204ENST00000521331 UBE4AQ14139 1066 aa18.83■□□□□ 0.6
PRKDC-204ENST00000521331 CLMNQ96JQ2 1002 aa18.83■□□□□ 0.6
PRKDC-204ENST00000521331 SRCIN1Q9C0H9 1055 aa18.83■□□□□ 0.6
PRKDC-204ENST00000521331 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
PRKDC-204ENST00000521331 JAG2Q9Y219 1238 aa18.83■□□□□ 0.6
PRKDC-204ENST00000521331 TNRC18O15417 2968 aaPredicted RBP18.83■□□□□ 0.6
PRKDC-204ENST00000521331 RASA3Q14644 834 aa18.82■□□□□ 0.6
PRKDC-204ENST00000521331 MFSD14BQ5SR56 506 aa18.82■□□□□ 0.6
PRKDC-204ENST00000521331 NBPF12Q5TAG4 269 aaPredicted RBP18.82■□□□□ 0.6
PRKDC-204ENST00000521331 PRPF38BQ5VTL8 546 aaKnown RBP18.82■□□□□ 0.6
PRKDC-204ENST00000521331 TDRD7Q8NHU6 1098 aaKnown RBP18.82■□□□□ 0.6
PRKDC-204ENST00000521331 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
PRKDC-204ENST00000521331 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
PRKDC-204ENST00000521331 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
PRKDC-204ENST00000521331 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
PRKDC-204ENST00000521331 ANKRD13AQ8IZ07 590 aa18.81■□□□□ 0.6
PRKDC-204ENST00000521331 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.81■□□□□ 0.6
PRKDC-204ENST00000521331 IGF2BP3O00425 579 aaKnown RBP eCLIP18.8■□□□□ 0.6
PRKDC-204ENST00000521331 USP2O75604 605 aaPredicted RBP18.8■□□□□ 0.6
PRKDC-204ENST00000521331 SPDYE2Q495Y8 402 aa18.8■□□□□ 0.6
PRKDC-204ENST00000521331 TTF2Q9UNY4 1162 aaKnown RBP18.8■□□□□ 0.6
PRKDC-204ENST00000521331 AOX1Q06278 1338 aa18.79■□□□□ 0.6
PRKDC-204ENST00000521331 GYG1P46976 350 aa18.79■□□□□ 0.6
PRKDC-204ENST00000521331 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
PRKDC-204ENST00000521331 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
PRKDC-204ENST00000521331 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
PRKDC-204ENST00000521331 MROH5Q6ZUA9 1318 aa18.78■□□□□ 0.6
PRKDC-204ENST00000521331 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
PRKDC-204ENST00000521331 TRIM17Q9Y577 477 aa18.78■□□□□ 0.6
PRKDC-204ENST00000521331 A0A1B0GUL6 1792 aa18.78■□□□□ 0.6
PRKDC-204ENST00000521331 UTYO14607 1347 aa18.77■□□□□ 0.6
PRKDC-204ENST00000521331 OTOP1Q7RTM1 612 aa18.77■□□□□ 0.6
PRKDC-204ENST00000521331 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
PRKDC-204ENST00000521331 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
PRKDC-204ENST00000521331 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.6
PRKDC-204ENST00000521331 PCDH10Q9P2E7 1040 aa18.77■□□□□ 0.6
PRKDC-204ENST00000521331 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
PRKDC-204ENST00000521331 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.59
PRKDC-204ENST00000521331 TESPA1A2RU30 521 aaPredicted RBP18.76■□□□□ 0.59
PRKDC-204ENST00000521331 GJA5P36382 358 aa18.76■□□□□ 0.59
PRKDC-204ENST00000521331 TNNI2P48788 182 aa18.76■□□□□ 0.59
PRKDC-204ENST00000521331 INTS3Q68E01 1043 aaKnown RBP18.76■□□□□ 0.59
PRKDC-204ENST00000521331 VPS37DQ86XT2 251 aa18.76■□□□□ 0.59
PRKDC-204ENST00000521331 TDRD3Q9H7E2 651 aaKnown RBP18.76■□□□□ 0.59
PRKDC-204ENST00000521331 NBPF7P0C2Y1 421 aaPredicted RBP18.75■□□□□ 0.59
PRKDC-204ENST00000521331 CRKP46108 304 aa18.75■□□□□ 0.59
PRKDC-204ENST00000521331 CRHR2Q13324 411 aa18.75■□□□□ 0.59
PRKDC-204ENST00000521331 RABL6Q3YEC7 729 aaPredicted RBP18.75■□□□□ 0.59
PRKDC-204ENST00000521331 FBXO33Q7Z6M2 555 aa18.75■□□□□ 0.59
PRKDC-204ENST00000521331 TBC1D22AQ8WUA7 517 aa18.75■□□□□ 0.59
PRKDC-204ENST00000521331 OPTNQ96CV9 577 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms