RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	RASIP1	Q5U651	963 aa		7.61	□□□□□ -1.19
CTNNA1-222	ENST00000520400	TXNDC11	Q6PKC3	985 aa		7.61	□□□□□ -1.19
CTNNA1-222	ENST00000520400	TPTE2	Q6XPS3	522 aa		7.61	□□□□□ -1.19
CTNNA1-222	ENST00000520400	DTHD1	Q6ZMT9	781 aa		7.61	□□□□□ -1.19
CTNNA1-222	ENST00000520400	STK35	Q8TDR2	534 aa		7.61	□□□□□ -1.19
CTNNA1-222	ENST00000520400	ENC1	O14682	589 aa		7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	SCAMP3	O14828	347 aa	Known RBP	7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	NID1	P14543	1247 aa		7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	DGKG	P49619	791 aa		7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	SNRPN	P63162	240 aa	Known RBP	7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	TAF1C	Q15572	869 aa	Predicted RBP	7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	BSND	Q8WZ55	320 aa		7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	SEC31B	Q9NQW1	1179 aa		7.6	□□□□□ -1.19
CTNNA1-222	ENST00000520400	SOX1	O00570	391 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	ESRRA	P11474	423 aa	Predicted RBP	7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	ALAS2	P22557	587 aa		7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	IL22RA1	Q8N6P7	574 aa		7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	RBSN	Q9H1K0	784 aa		7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	TTF2	Q9UNY4	1162 aa	Known RBP	7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	PCDHGB7	Q9Y5F8	929 aa		7.59	□□□□□ -1.19
CTNNA1-222	ENST00000520400	WIPF1	O43516	503 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PTPRA	P18433	802 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ZNF76	P36508	570 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	RACK1	P63244	317 aa	Known RBP	7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PTPN12	Q05209	780 aa	Known RBP	7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PCDH1	Q08174	1060 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ZNF394	Q53GI3	561 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	NT5DC4	Q86YG4	428 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ANKRD24	Q8TF21	1146 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	TRIM11	Q96F44	468 aa		7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	NECAB3	Q96P71	396 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNNA1-222	ENST00000520400	LINC01387	J3KSC0	135 aa		7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	CDC27	P30260	824 aa		7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ST13	P50502	369 aa	Known RBP	7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ERMP1	Q7Z2K6	904 aa		7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	LRRC4B	Q9NT99	713 aa		7.57	□□□□□ -1.2
CTNNA1-222	ENST00000520400	LILRB5	O75023	590 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	DEAF1	O75398	565 aa	Predicted RBP	7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	MAP3K11	Q16584	847 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	KANK3	Q6NY19	840 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	LINC00114	Q6XXX2	140 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	SVOP	Q8N4V2	548 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	GALNT11	Q8NCW6	608 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	CARD10	Q9BWT7	1032 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	SRA1	Q9HD15	236 aa	Known RBP	7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PRDM6	Q9NQX0	595 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	METTL5	Q9NRN9	209 aa	Known RBP	7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PPM1H	Q9ULR3	514 aa		7.56	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ECEL1	O95672	775 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	B3GALT4	O96024	378 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	CTSB	P07858	339 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	XRCC5	P13010	732 aa	Known RBP	7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	AMPD1	P23109	780 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	SETDB1	Q15047	1291 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	CCDC85B	Q15834	202 aa	Predicted RBP	7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	MSL1	Q68DK7	614 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	MPRIP	Q6WCQ1	1025 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	RNF34	Q969K3	372 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	NRSN2	Q9GZP1	204 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	KBTBD4	Q9NVX7	518 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	TLR6	Q9Y2C9	796 aa		7.55	□□□□□ -1.2
CTNNA1-222	ENST00000520400	BMP6	P22004	513 aa		7.54	□□□□□ -1.2
CTNNA1-222	ENST00000520400	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.54	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PPP4R2	Q9NY27	417 aa		7.54	□□□□□ -1.2
CTNNA1-222	ENST00000520400	KCNK4	Q9NYG8	393 aa		7.54	□□□□□ -1.2
CTNNA1-222	ENST00000520400	GPN3	Q9UHW5	284 aa	Predicted RBP	7.54	□□□□□ -1.2
CTNNA1-222	ENST00000520400		H3BRJ5	948 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	DDX3Y	O15523	660 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ADAM11	O75078	769 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	TNNI2	P48788	182 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	GRIN3A	Q8TCU5	1115 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	KLHDC7B	Q96G42	594 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	ACBD3	Q9H3P7	528 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	GGT7	Q9UJ14	662 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	DDX41	Q9UJV9	622 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	PPME1	Q9Y570	386 aa		7.53	□□□□□ -1.2
CTNNA1-222	ENST00000520400	FSCN2	O14926	492 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	ERCC5	P28715	1186 aa	Predicted RBP	7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	IKBKE	Q14164	716 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	SV2B	Q7L1I2	683 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	PDZD3	Q86UT5	571 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	WFDC8	Q8IUA0	241 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	PHC3	Q8NDX5	983 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	SLC7A3	Q8WY07	619 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	NOC4L	Q9BVI4	516 aa	Known RBP	7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	ADAMTS1	Q9UHI8	967 aa		7.52	□□□□□ -1.21
CTNNA1-222	ENST00000520400	FAM229A	H3BQW9	127 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	DLGAP3	O95886	979 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	SELP	P16109	830 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	TFE3	P19532	575 aa	Predicted RBP	7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	GART	P22102	1010 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	RANGAP1	P46060	587 aa	Predicted RBP	7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	LIG3	P49916	1009 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	PTPN11	Q06124	597 aa	Predicted RBP	7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	PCNX4	Q63HM2	1172 aa		7.51	□□□□□ -1.21
CTNNA1-222	ENST00000520400	NEDD1	Q8NHV4	660 aa		7.51	□□□□□ -1.21

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