RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 RBM47A0AV96 593 aaKnown RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TM4SF5O14894 197 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 LILRB5O75023 590 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SMNDC1O75940 238 aaKnown RBP eCLIP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 RPLP1P05386 114 aaKnown RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ESRRAP11474 423 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 EDN3P14138 238 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CDC27P30260 824 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 GNA15P30679 374 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 GSTM4Q03013 218 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PTPN11Q06124 597 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PCDH1Q08174 1060 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MRPL58Q14197 206 aaKnown RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SETDB1Q15047 1291 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FOXD4L6Q3SYB3 417 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ZNF394Q53GI3 561 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MSL1Q68DK7 614 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FOXD4L3Q6VB84 417 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 NPM2Q86SE8 214 aaKnown RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 WFDC8Q8IUA0 241 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TMEM102Q8N9M5 508 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TMEM87AQ8NBN3 555 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 WDR89Q96FK6 387 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 DNAJC25Q9H1X3 360 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ZNF576Q9H609 170 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SEC31BQ9NQW1 1179 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 GPN3Q9UHW5 284 aaPredicted RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SOX13Q9UN79 622 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TTF2Q9UNY4 1162 aaKnown RBP3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PCDHB5Q9Y5E4 795 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CSADQ9Y600 493 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 AK5Q9Y6K8 562 aa3.13□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 A0A0A0MRY4 1105 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MINDY4BA8MYZ0 360 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SORBS3O60504 671 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 EIF4BP23588 611 aaKnown RBP3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 RANGAP1P46060 587 aaPredicted RBP3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TNNI2P48788 182 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FAM160A1Q05DH4 1040 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ALG1LQ6GMV1 187 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TMC4Q7Z404 712 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 USP26Q9BXU7 913 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MRS2Q9HD23 443 aa3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 AVENQ9NQS1 362 aaPredicted RBP3.12□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ENC1O14682 589 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FSCN2O14926 492 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 HOXD8P13378 290 aaPredicted RBP3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PTPRAP18433 802 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 LIG1P18858 919 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 HDLBPQ00341 1268 aaKnown RBP3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SEPT6Q14141 434 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 IKBKEQ14164 716 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ZNF326Q5BKZ1 582 aaKnown RBP3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 BSNDQ8WZ55 320 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PMEPA1Q969W9 287 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 BHLHE41Q9C0J9 482 aaPredicted RBP3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ADAM19Q9H013 955 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 RBSNQ9H1K0 784 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 LGR6Q9HBX8 967 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CBX8Q9HC52 389 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SPG7Q9UQ90 795 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PPME1Q9Y570 386 aa3.11□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 KRBA1A5PL33 1030 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TLR3O15455 904 aaKnown RBP3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ITGB2P05107 769 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 NEFLP07196 543 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 DRD2P14416 443 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SELPP16109 830 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 BMP6P22004 513 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MAOBP27338 520 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CHRNA4P43681 627 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 GSK3AP49840 483 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 RACK1P63244 317 aaKnown RBP3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 KANK3Q6NY19 840 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ILDR2Q71H61 639 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FBXO27Q8NI29 283 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 JARID2Q92833 1246 aaPredicted RBP3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 KCNB2Q92953 911 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CLEC4MQ9H2X3 399 aaPredicted RBP3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 C11orf16Q9NQ32 467 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FRRS1LQ9P0K9 344 aa3.1□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 H3BRJ5 948 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 TFE3P19532 575 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 ITPKAP23677 461 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 NRG1Q02297 640 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CCDC85BQ15834 202 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PCNX4Q63HM2 1172 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 MAP1SQ66K74 1059 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 PRPF40BQ6NWY9 871 aaKnown RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 UBE3DQ7Z6J8 389 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SULF2Q8IWU5 870 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FMR1NBQ8N0W7 255 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 SHISA5Q8N114 240 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FBF1Q8TES7 1133 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 NECAB3Q96P71 396 aaPredicted RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 CCDC86Q9H6F5 360 aaKnown RBP3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 KBTBD4Q9NVX7 518 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 FAM8A1Q9UBU6 413 aa3.09□□□□□ -1.91
TVP23C-CDRT4-202ENST00000518506 USP31Q70CQ4 1352 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms