RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 MYO1BO43795 1136 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 GNRH1P01148 92 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 DLGAP5Q15398 846 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.36
SH2D4A-202ENST00000518040 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 PRMT2P55345 433 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 KIF22Q14807 665 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 DPF3Q92784 378 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 LEMD3Q9Y2U8 911 aa12.77□□□□□ -0.37
SH2D4A-202ENST00000518040 CEP290O15078 2479 aa12.76□□□□□ -0.37
SH2D4A-202ENST00000518040 ZNF804BA4D1E1 1349 aa12.76□□□□□ -0.37
SH2D4A-202ENST00000518040 CHL1O00533 1208 aa12.76□□□□□ -0.37
SH2D4A-202ENST00000518040 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
SH2D4A-202ENST00000518040 PTPN18Q99952 460 aa12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 CWC25Q9NXE8 425 aaPredicted RBP12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 FZD1Q9UP38 647 aa12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 ZNF646O15015 1829 aaPredicted RBP12.75□□□□□ -0.37
SH2D4A-202ENST00000518040 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
SH2D4A-202ENST00000518040 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
SH2D4A-202ENST00000518040 GJA5P36382 358 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 GTF2A2P52657 109 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 CTSWP56202 376 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 GTF2IP78347 998 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 CAP1Q01518 475 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 TNFAIP1Q13829 316 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 KRT24Q2M2I5 525 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 MYD88Q99836 296 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 ANKRD2Q9GZV1 360 aa12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 ZCCHC17Q9NP64 241 aaKnown RBP12.73□□□□□ -0.37
SH2D4A-202ENST00000518040 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
SH2D4A-202ENST00000518040 CAPN2P17655 700 aa12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 IGHMBP2P38935 993 aaKnown RBP12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 NBPF12Q5TAG4 269 aaPredicted RBP12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 CHMP4AQ9BY43 222 aa12.71□□□□□ -0.37
SH2D4A-202ENST00000518040 CCL15-CCL14A0A0B4J2E2 113 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 TLR2O60603 784 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 CLCN6P51797 869 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 LACTBP83111 547 aaPredicted RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 CCL15Q16663 113 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 BRI3BPQ8WY22 251 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 ELP3Q9H9T3 547 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 HOXD10P28358 340 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 RASA3Q14644 834 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
SH2D4A-202ENST00000518040 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 KCNJ4P48050 445 aa12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 GJA8P48165 433 aa12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 CFAP100Q494V2 611 aa12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 CD209Q9NNX6 404 aa12.69□□□□□ -0.38
SH2D4A-202ENST00000518040 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
SH2D4A-202ENST00000518040 GJB1P08034 283 aa12.68□□□□□ -0.38
SH2D4A-202ENST00000518040 UBE2Q1Q7Z7E8 422 aa12.68□□□□□ -0.38
SH2D4A-202ENST00000518040 GREM2Q9H772 168 aa12.68□□□□□ -0.38
SH2D4A-202ENST00000518040 CSADQ9Y600 493 aa12.68□□□□□ -0.38
SH2D4A-202ENST00000518040 ZBTB7BO15156 539 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 CETPP11597 493 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 PRMT6Q96LA8 375 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 MPHOSPH8Q99549 860 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 CUL9Q8IWT3 2517 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 RBM5P52756 815 aaKnown RBP eCLIP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 UBXN2AP68543 259 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms