RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
PVT1-206ENST00000517838 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 E9PSI1 815 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 NUDT7P0C024 238 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 TM4SF4P48230 202 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 RPS8P62241 208 aaKnown RBP9.43□□□□□ -0.9
PVT1-206ENST00000517838 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 GMLQ99445 158 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 EYA3Q99504 573 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 R3HDMLQ9H3Y0 253 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 EMILIN3Q9NT22 766 aa9.43□□□□□ -0.9
PVT1-206ENST00000517838 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
PVT1-206ENST00000517838 NUP98P52948 1817 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 GPR25O00155 361 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 KRT24Q2M2I5 525 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 RTL5Q5HYW3 569 aaPredicted RBP9.42□□□□□ -0.9
PVT1-206ENST00000517838 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
PVT1-206ENST00000517838 PRAMEF18Q5VWM3 479 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
PVT1-206ENST00000517838 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 ISCA1Q9BUE6 129 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
PVT1-206ENST00000517838 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
PVT1-206ENST00000517838 ATP5J2-PTCD1G3V325 749 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
PVT1-206ENST00000517838 FBXO46Q6PJ61 603 aaPredicted RBP9.41□□□□□ -0.9
PVT1-206ENST00000517838 EXOC6Q8TAG9 804 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 MYOZ2Q9NPC6 264 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 BABAM1Q9NWV8 329 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 CHPF2Q9P2E5 772 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 LAMB4A4D0S4 1761 aa9.41□□□□□ -0.9
PVT1-206ENST00000517838 ZNF521Q96K83 1311 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 PITPNM2Q9BZ72 1349 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 COL4A1P02462 1669 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 PLIN1O60240 522 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 UFL1O94874 794 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 RIPK4P57078 832 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 NBPF9Q3BBW0 867 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 PLBD2Q8NHP8 589 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 PNNQ9H307 717 aaKnown RBP9.4□□□□□ -0.9
PVT1-206ENST00000517838 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.9
PVT1-206ENST00000517838 MKI67P46013 3256 aaKnown RBP9.4□□□□□ -0.9
PVT1-206ENST00000517838 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.91
PVT1-206ENST00000517838 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
PVT1-206ENST00000517838 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
PVT1-206ENST00000517838 TBC1D12O60347 775 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 FKTNO75072 461 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 TRIM28Q13263 835 aaKnown RBP9.39□□□□□ -0.91
PVT1-206ENST00000517838 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
PVT1-206ENST00000517838 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 CFHR5Q9BXR6 569 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 ZNF609O15014 1411 aa9.39□□□□□ -0.91
PVT1-206ENST00000517838 CHL1O00533 1208 aa9.38□□□□□ -0.91
PVT1-206ENST00000517838 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
PVT1-206ENST00000517838 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
PVT1-206ENST00000517838 LHX6Q9UPM6 363 aa9.38□□□□□ -0.91
PVT1-206ENST00000517838 HTTP42858 3142 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
PVT1-206ENST00000517838 LDLRAD1Q5T700 205 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 PODNQ7Z5L7 613 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 ZBTB38Q8NAP3 1195 aaPredicted RBP9.37□□□□□ -0.91
PVT1-206ENST00000517838 MXD3Q9BW11 206 aa9.37□□□□□ -0.91
PVT1-206ENST00000517838 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 WNT10BO00744 389 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 TMPOP42166 694 aaKnown RBP9.36□□□□□ -0.91
PVT1-206ENST00000517838 FXR1P51114 621 aaKnown RBP eCLIP9.36□□□□□ -0.91
PVT1-206ENST00000517838 SREBF2Q12772 1141 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 PRKG1Q13976 671 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 DACT2Q5SW24 774 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
PVT1-206ENST00000517838 DBF4Q9UBU7 674 aaPredicted RBP9.36□□□□□ -0.91
PVT1-206ENST00000517838 ANKRD36CQ5JPF3 1778 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
PVT1-206ENST00000517838 WDR63Q8IWG1 891 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
PVT1-206ENST00000517838 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
PVT1-206ENST00000517838 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 FZD1Q9UP38 647 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 TRIM17Q9Y577 477 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 BRCA2P51587 3418 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 LAMB2P55268 1798 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 PAPPA2Q9BXP8 1791 aa9.35□□□□□ -0.91
PVT1-206ENST00000517838 XDHP47989 1333 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 TAF1P21675 1872 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms