RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 HHIPQ96QV1 700 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 LIN7BQ9HAP6 207 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 LATS2Q9NRM7 1088 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 A0A1W2PP55 124 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 HP1BP3Q5SSJ5 553 aaPredicted RBP6.25□□□□□ -1.41
CAST-242ENST00000515063 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 ADAMTSL4Q6UY14 1074 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 SLC51AQ86UW1 340 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 CCNJLQ8IV13 435 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 KLHDC7BQ96G42 594 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 NIF3L1Q9GZT8 377 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 EHD4Q9H223 541 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 ZFYVE1Q9HBF4 777 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 MYO15BQ96JP2 1530 aa6.25□□□□□ -1.41
CAST-242ENST00000515063 SHROOM4Q9ULL8 1493 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 A0A096LPE4 126 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 A0A1W2PPZ6 126 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 EIF1AYO14602 144 aaKnown RBP6.24□□□□□ -1.41
CAST-242ENST00000515063 GPR182O15218 404 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 ALX3O95076 343 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 MAPK1P28482 360 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 ORC1Q13415 861 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 ANKRD34AQ69YU3 496 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 VN1R5Q7Z5H4 357 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 AGGF1Q8N302 714 aaeCLIP6.24□□□□□ -1.41
CAST-242ENST00000515063 FOXD4L4Q8WXT5 416 aaPredicted RBP6.24□□□□□ -1.41
CAST-242ENST00000515063 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
CAST-242ENST00000515063 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 IVNS1ABPQ9Y6Y0 642 aa6.24□□□□□ -1.41
CAST-242ENST00000515063 SOX1O00570 391 aaPredicted RBP6.23□□□□□ -1.41
CAST-242ENST00000515063 DHX15O43143 795 aaKnown RBP6.23□□□□□ -1.41
CAST-242ENST00000515063 SART1O43290 800 aaKnown RBP6.23□□□□□ -1.41
CAST-242ENST00000515063 WISP1O95388 367 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 ESRRAP11474 423 aaPredicted RBP6.23□□□□□ -1.41
CAST-242ENST00000515063 NLRP12P59046 1061 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 PRSS36Q5K4E3 855 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 PRR23CQ6ZRP0 262 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 ZSCAN29Q8IWY8 852 aaPredicted RBP6.23□□□□□ -1.41
CAST-242ENST00000515063 CCDC74AQ96AQ1 378 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 CSRNP1Q96S65 589 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 RUSC1Q9BVN2 902 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 NLRP2Q9NX02 1062 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 KCNK4Q9NYG8 393 aa6.23□□□□□ -1.41
CAST-242ENST00000515063 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 GSC2O15499 205 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 ADAM11O75078 769 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 GADD45BO75293 160 aaPredicted RBP6.22□□□□□ -1.41
CAST-242ENST00000515063 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
CAST-242ENST00000515063 PCDH1Q08174 1060 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 PRPF40BQ6NWY9 871 aaKnown RBP6.22□□□□□ -1.41
CAST-242ENST00000515063 FDX2Q6P4F2 183 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 KIAA1211Q6ZU35 1233 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 TMC7Q7Z402 723 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 UBASH3BQ8TF42 649 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
CAST-242ENST00000515063 TCF12Q99081 682 aa6.22□□□□□ -1.41
CAST-242ENST00000515063 MEGF11A6BM72 1044 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 METTL12A8MUP2 240 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 DDX3YO15523 660 aaKnown RBP6.21□□□□□ -1.42
CAST-242ENST00000515063 IGHA2P01877 340 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 CYP11A1P05108 521 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
CAST-242ENST00000515063 GSTM4Q03013 218 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 ZMYM1Q5SVZ6 1142 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 NUTM2GQ5VZR2 741 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 USP26Q9BXU7 913 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 CYP4F12Q9HCS2 524 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 RAXQ9Y2V3 346 aa6.21□□□□□ -1.42
CAST-242ENST00000515063 ITPKAP23677 461 aa6.2□□□□□ -1.42
CAST-242ENST00000515063 GRIA4P48058 902 aa6.2□□□□□ -1.42
CAST-242ENST00000515063 PLCB3Q01970 1234 aa6.2□□□□□ -1.42
CAST-242ENST00000515063 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
CAST-242ENST00000515063 TREHO43280 583 aa6.19□□□□□ -1.42
CAST-242ENST00000515063 GAS2O43903 313 aaKnown RBP6.19□□□□□ -1.42
CAST-242ENST00000515063 PDIA4P13667 645 aaKnown RBP6.19□□□□□ -1.42
CAST-242ENST00000515063 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
CAST-242ENST00000515063 FAM46AQ96IP4 442 aaKnown RBP6.19□□□□□ -1.42
CAST-242ENST00000515063 MYRFLQ96LU7 910 aa6.19□□□□□ -1.42
CAST-242ENST00000515063 UBL7Q96S82 380 aaPredicted RBP6.19□□□□□ -1.42
CAST-242ENST00000515063 ZNF576Q9H609 170 aa6.19□□□□□ -1.42
CAST-242ENST00000515063 STOML1Q9UBI4 398 aa6.19□□□□□ -1.42
CAST-242ENST00000515063 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 LOC100289279A0A1B0GTE1 492 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 SCO2A0A1W2PP80 73 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 B3GALT4O96024 378 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 XRCC5P13010 732 aaKnown RBP6.18□□□□□ -1.42
CAST-242ENST00000515063 ITGB7P26010 798 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 EXOSC6Q5RKV6 272 aaKnown RBP6.18□□□□□ -1.42
CAST-242ENST00000515063 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
CAST-242ENST00000515063 HOMEZQ8IX15 550 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 FBF1Q8TES7 1133 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 SUGCTQ9HAC7 445 aa6.18□□□□□ -1.42
CAST-242ENST00000515063 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms