RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ERC2O15083 957 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 EPS15P42566 896 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEDD9-214ENST00000513989 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 PSME4Q14997 1843 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 MYH3P11055 1940 aa12.41□□□□□ -0.42
NEDD9-214ENST00000513989 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 VEGFBP49765 207 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 AOC3Q16853 763 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
NEDD9-214ENST00000513989 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 LARGE2Q8N3Y3 721 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 ECHDC1Q9NTX5 307 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
NEDD9-214ENST00000513989 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 FOXN1O15353 648 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 PPIP5K2O43314 1243 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 MX1P20591 662 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 BCAMP50895 628 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
NEDD9-214ENST00000513989 PODNQ7Z5L7 613 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 FAM84BQ96KN1 310 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-214ENST00000513989 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
NEDD9-214ENST00000513989 ZNF646O15015 1829 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-214ENST00000513989 TTC41PQ6P2S7 1318 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 SNAP23O00161 211 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 SEMA3EO15041 775 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 GYG1P46976 350 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 NIM1KQ8IY84 436 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
NEDD9-214ENST00000513989 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
NEDD9-214ENST00000513989 DENND2AQ9ULE3 1009 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
NEDD9-214ENST00000513989 GLRX3O76003 335 aaKnown RBP12.37□□□□□ -0.43
NEDD9-214ENST00000513989 ATP5JP18859 108 aa12.37□□□□□ -0.43
NEDD9-214ENST00000513989 ADORA1P30542 326 aa12.37□□□□□ -0.43
NEDD9-214ENST00000513989 CXCL9Q07325 125 aa12.37□□□□□ -0.43
NEDD9-214ENST00000513989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEDD9-214ENST00000513989 CD209Q9NNX6 404 aa12.37□□□□□ -0.43
NEDD9-214ENST00000513989 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
NEDD9-214ENST00000513989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-214ENST00000513989 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
NEDD9-214ENST00000513989 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 CAPN15O75808 1086 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 PDE1AP54750 535 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 AOX1Q06278 1338 aa12.36□□□□□ -0.43
NEDD9-214ENST00000513989 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TRAF5O00463 557 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 ZBTB22O15209 634 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 IL1R1P14778 569 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 PHKA1P46020 1223 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 CST9Q5W186 159 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TTLL5Q6EMB2 1281 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TXNRD3Q86VQ6 643 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 ZGPATQ8N5A5 531 aaKnown RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TDRD7Q8NHU6 1098 aaKnown RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 GPR101Q96P66 508 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 OSBPL3Q9H4L5 887 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
NEDD9-214ENST00000513989 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
NEDD9-214ENST00000513989 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 ECE2O60344 883 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 KLRK1P26718 216 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 ARID4AP29374 1257 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 RGS3P49796 1198 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 TNIP1Q15025 636 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 LRRFIP1Q32MZ4 808 aaKnown RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-214ENST00000513989 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 ZNF609O15014 1411 aa12.34□□□□□ -0.43
NEDD9-214ENST00000513989 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
NEDD9-214ENST00000513989 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
NEDD9-214ENST00000513989 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
NEDD9-214ENST00000513989 IGSF3O75054 1194 aa12.33□□□□□ -0.44
NEDD9-214ENST00000513989 RAD17O75943 681 aa12.33□□□□□ -0.44
NEDD9-214ENST00000513989 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
NEDD9-214ENST00000513989 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms