RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 CCL15Q16663 113 aa10.22□□□□□ -0.77
DEPDC1B-205ENST00000512078 SUPT20HL1Q3ZLR7 823 aa10.22□□□□□ -0.77
DEPDC1B-205ENST00000512078 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
DEPDC1B-205ENST00000512078 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
DEPDC1B-205ENST00000512078 RIPOR2Q9Y4F9 1068 aa10.22□□□□□ -0.77
DEPDC1B-205ENST00000512078 ZNF804BA4D1E1 1349 aa10.21□□□□□ -0.77
DEPDC1B-205ENST00000512078 XDHP47989 1333 aa10.21□□□□□ -0.77
DEPDC1B-205ENST00000512078 MED23Q9ULK4 1368 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 GTF2A2P52657 109 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 UBXN2AP68543 259 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 PROSER3Q2NL68 480 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 RAET1EQ8TD07 263 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 TRIM47Q96LD4 638 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 ELP3Q9H9T3 547 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 NCOR1O75376 2440 aa10.21□□□□□ -0.78
DEPDC1B-205ENST00000512078 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 HOXD10P28358 340 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 CTGFP29279 349 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 FAM89AQ96GI7 184 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 IRS2Q9Y4H2 1338 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
DEPDC1B-205ENST00000512078 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 ANXA1P04083 346 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 OSBPP22059 807 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 NBPF12Q5TAG4 269 aaPredicted RBP10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 COPS6Q7L5N1 327 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 MYPNQ86TC9 1320 aa10.19□□□□□ -0.78
DEPDC1B-205ENST00000512078 MAGEA10P43363 369 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 KIAA0825Q8IV33 1275 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 XAGE3Q8WTP9 111 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 SEC31BQ9NQW1 1179 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 MYH3P11055 1940 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 DDX60LQ5H9U9 1706 aaKnown RBP10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 IRS4O14654 1257 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 PSMC4P43686 418 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 C17orf99Q6UX52 265 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 C7orf61Q8IZ16 206 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 SLAIN1Q8ND83 568 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 ISCA1Q9BUE6 129 aa10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
DEPDC1B-205ENST00000512078 DOCK3Q8IZD9 2030 aa10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 EIF2S2P20042 333 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 AIMP1Q12904 312 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 DLGAP5Q15398 846 aa10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 PAWRQ96IZ0 340 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 UBE2OQ9C0C9 1292 aaKnown RBP10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 COA1Q9GZY4 146 aa10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 CRISPLD2Q9H0B8 497 aa10.17□□□□□ -0.78
DEPDC1B-205ENST00000512078 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
DEPDC1B-205ENST00000512078 NECAB2Q7Z6G3 386 aa10.16□□□□□ -0.78
DEPDC1B-205ENST00000512078 ADGRA2Q96PE1 1338 aa10.16□□□□□ -0.78
DEPDC1B-205ENST00000512078 BTBD19C9JJ37 291 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 HSPA5P11021 654 aaKnown RBP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 CETPP11597 493 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 VGLL4Q14135 290 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 TTLL5Q6EMB2 1281 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 DEFB118Q96PH6 123 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 PAK6Q9NQU5 681 aaPredicted RBP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 LAMA2P24043 3122 aaKnown RBP10.15□□□□□ -0.78
DEPDC1B-205ENST00000512078 CLRN2A0PK11 232 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 SPDYE5A6NIY4 337 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 MYO1BO43795 1136 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 SYN1P17600 705 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 PRKCZQ05513 592 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 RASA3Q14644 834 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 ANKLE1Q8NAG6 615 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 DIS3LQ8TF46 1054 aaKnown RBP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 FAM161BQ96MY7 647 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 CPA4Q9UI42 421 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 SPDYE2BA6NHP3 402 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 SPDYE6P0CI01 402 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 CCDC152Q4G0S7 254 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 ANKRD18AQ8IVF6 992 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.14□□□□□ -0.79
DEPDC1B-205ENST00000512078 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms