RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ABT1Q9ULW3 272 aaKnown RBP14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 JAG2Q9Y219 1238 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 TLL2Q9Y6L7 1015 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 WNT10BO00744 389 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 RLBP1P12271 317 aa14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 PUM3Q15397 648 aaKnown RBP14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 ZBED3Q96IU2 234 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-205ENST00000511421 PCNTO95613 3336 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 PITPNM2Q9BZ72 1349 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 GNAI2P04899 355 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 SAPCD2Q86UD0 394 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 SULF1Q8IWU6 871 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 HDAC9Q9UKV0 1011 aa14.48□□□□□ -0.09
SH3RF1-205ENST00000511421 SRGAP3O43295 1099 aa14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 IFIT1P09914 478 aaKnown RBP14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 BCAMP50895 628 aa14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 LPIN2Q92539 896 aa14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 ZNF408Q9H9D4 720 aa14.47□□□□□ -0.09
SH3RF1-205ENST00000511421 CAVIN4Q5BKX8 364 aa14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 VPS37DQ86XT2 251 aa14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 CEP126Q9P2H0 1117 aa14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 IQSEC3Q9UPP2 1182 aaPredicted RBP14.46□□□□□ -0.09
SH3RF1-205ENST00000511421 F8W031 263 aaPredicted RBP14.46□□□□□ -0.1
SH3RF1-205ENST00000511421 SLC5A1P13866 664 aa14.46□□□□□ -0.1
SH3RF1-205ENST00000511421 MFSD14BQ5SR56 506 aa14.46□□□□□ -0.1
SH3RF1-205ENST00000511421 SCAF8Q9UPN6 1271 aaKnown RBP14.46□□□□□ -0.1
SH3RF1-205ENST00000511421 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.1
SH3RF1-205ENST00000511421 PNMA6EA0A0J9YXQ4 647 aa14.45□□□□□ -0.1
SH3RF1-205ENST00000511421 ZBTB7BO15156 539 aaPredicted RBP14.45□□□□□ -0.1
SH3RF1-205ENST00000511421 CDCA5Q96FF9 252 aa14.45□□□□□ -0.1
SH3RF1-205ENST00000511421 WDR33Q9C0J8 1336 aaKnown RBP14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 ATP2B3Q16720 1220 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 CFAP100Q494V2 611 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 CYP4F22Q6NT55 531 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 HHIPL1Q96JK4 782 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 CAPNS2Q96L46 248 aa14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 GBA2Q9HCG7 927 aaPredicted RBP14.44□□□□□ -0.1
SH3RF1-205ENST00000511421 HSPA1AP0DMV8 641 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 HSPA1BP0DMV9 641 aaKnown RBP14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 CHAF1AQ13111 956 aaPredicted RBP14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 GRIK5Q16478 980 aa14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 PRMT6Q96LA8 375 aaPredicted RBP14.43□□□□□ -0.1
SH3RF1-205ENST00000511421 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 FRAT2O75474 233 aaPredicted RBP14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 ECE1P42892 770 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 TTF2Q9UNY4 1162 aaKnown RBP14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 AOX1Q06278 1338 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 HUNKP57058 714 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 TFCP2Q12800 502 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 POLA2Q14181 598 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 PRAMEF18Q5VWM3 479 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 PAXIP1Q6ZW49 1069 aaPredicted RBP14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 C2orf69Q8N8R5 385 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 TBC1D22AQ8WUA7 517 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 RCAN3Q9UKA8 241 aa14.42□□□□□ -0.1
SH3RF1-205ENST00000511421 ADORA1P30542 326 aa14.41□□□□□ -0.1
SH3RF1-205ENST00000511421 APOBEC3FQ8IUX4 373 aaKnown RBP14.41□□□□□ -0.1
SH3RF1-205ENST00000511421 SSH3Q8TE77 659 aa14.41□□□□□ -0.1
SH3RF1-205ENST00000511421 SERPINA10Q9UK55 444 aa14.41□□□□□ -0.1
SH3RF1-205ENST00000511421 ZBTB22O15209 634 aa14.4□□□□□ -0.1
SH3RF1-205ENST00000511421 PHKA1P46020 1223 aa14.4□□□□□ -0.1
SH3RF1-205ENST00000511421 TIMM10P62072 90 aa14.4□□□□□ -0.1
SH3RF1-205ENST00000511421 WBP1LQ9NX94 342 aa14.4□□□□□ -0.1
SH3RF1-205ENST00000511421 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
SH3RF1-205ENST00000511421 MS4A1P11836 297 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 CRKP46108 304 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 GRM1Q13255 1194 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 SUGT1Q9Y2Z0 365 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 AOC2O75106 756 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 MAP2K2P36507 400 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 RBM5P52756 815 aaKnown RBP eCLIP14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 FKBP1BP68106 108 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 HDLBPQ00341 1268 aaKnown RBP14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 CCDC102BQ68D86 513 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 RGMBQ6NW40 437 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 WDR66Q8TBY9 1149 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 GNL3LQ9NVN8 582 aaKnown RBP14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 AKAP2Q9Y2D5 859 aa14.39□□□□□ -0.11
SH3RF1-205ENST00000511421 ARAP2Q8WZ64 1704 aa14.38□□□□□ -0.11
SH3RF1-205ENST00000511421 MYO1BO43795 1136 aa14.38□□□□□ -0.11
SH3RF1-205ENST00000511421 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
SH3RF1-205ENST00000511421 MOB2Q70IA6 237 aa14.38□□□□□ -0.11
SH3RF1-205ENST00000511421 XAGE2Q96GT9 111 aa14.38□□□□□ -0.11
SH3RF1-205ENST00000511421 THSD7BQ9C0I4 1608 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms