RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	COL1A1	P02452	1464 aa	Predicted RBP	31.13	■■■□□ 2.57
HDAC10-219	ENST00000497483	SASH1	O94885	1247 aa		31.12	■■■□□ 2.57
HDAC10-219	ENST00000497483	LBX1	P52954	281 aa		31.12	■■■□□ 2.57
HDAC10-219	ENST00000497483	FAM205A	Q6ZU69	1335 aa		31.12	■■■□□ 2.57
HDAC10-219	ENST00000497483	LRRC24	Q50LG9	513 aa		31.11	■■■□□ 2.57
HDAC10-219	ENST00000497483	VGLL2	Q8N8G2	317 aa		31.11	■■■□□ 2.57
HDAC10-219	ENST00000497483	MTMR14	Q8NCE2	650 aa		31.11	■■■□□ 2.57
HDAC10-219	ENST00000497483	TDRD7	Q8NHU6	1098 aa	Known RBP	31.11	■■■□□ 2.57
HDAC10-219	ENST00000497483	FAM155A	B1AL88	458 aa	Predicted RBP	31.1	■■■□□ 2.57
HDAC10-219	ENST00000497483	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.1	■■■□□ 2.57
HDAC10-219	ENST00000497483	CCDC102A	Q96A19	550 aa		31.1	■■■□□ 2.57
HDAC10-219	ENST00000497483	CA12	O43570	354 aa		31.09	■■■□□ 2.57
HDAC10-219	ENST00000497483	HIBADH	P31937	336 aa	Known RBP	31.09	■■■□□ 2.57
HDAC10-219	ENST00000497483	METTL24	Q5JXM2	366 aa		31.09	■■■□□ 2.57
HDAC10-219	ENST00000497483	FAM84B	Q96KN1	310 aa	Predicted RBP	31.09	■■■□□ 2.57
HDAC10-219	ENST00000497483	MYH13	Q9UKX3	1938 aa		31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	PDE8B	O95263	885 aa		31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	UBTFL1	P0CB47	393 aa	Predicted RBP	31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	GYG1	P46976	350 aa		31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	RFX5	P48382	616 aa	Predicted RBP	31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	ARHGAP45	Q92619	1136 aa		31.08	■■■□□ 2.57
HDAC10-219	ENST00000497483	DIEXF	Q68CQ4	756 aa	Known RBP	31.07	■■■□□ 2.56
HDAC10-219	ENST00000497483	KLHDC4	Q8TBB5	520 aa		31.07	■■■□□ 2.56
HDAC10-219	ENST00000497483	SCAF8	Q9UPN6	1271 aa	Known RBP	31.07	■■■□□ 2.56
HDAC10-219	ENST00000497483	SLC10A3	P09131	477 aa		31.06	■■■□□ 2.56
HDAC10-219	ENST00000497483	ZNF157	P51786	506 aa	Predicted RBP	31.06	■■■□□ 2.56
HDAC10-219	ENST00000497483	DLGAP5	Q15398	846 aa		31.06	■■■□□ 2.56
HDAC10-219	ENST00000497483	MIER1	Q8N108	512 aa		31.06	■■■□□ 2.56
HDAC10-219	ENST00000497483	AKAP11	Q9UKA4	1901 aa		31.05	■■■□□ 2.56
HDAC10-219	ENST00000497483	FBXO33	Q7Z6M2	555 aa		31.05	■■■□□ 2.56
HDAC10-219	ENST00000497483	HDAC5	Q9UQL6	1122 aa		31.05	■■■□□ 2.56
HDAC10-219	ENST00000497483	PTPN12	Q05209	780 aa	Known RBP	31.04	■■■□□ 2.56
HDAC10-219	ENST00000497483	ZIC5	Q96T25	663 aa		31.04	■■■□□ 2.56
HDAC10-219	ENST00000497483	JAG2	Q9Y219	1238 aa		31.04	■■■□□ 2.56
HDAC10-219	ENST00000497483	EYA2	O00167	538 aa		31.03	■■■□□ 2.56
HDAC10-219	ENST00000497483	NF2	P35240	595 aa		31.03	■■■□□ 2.56
HDAC10-219	ENST00000497483	MFSD14B	Q5SR56	506 aa		31.03	■■■□□ 2.56
HDAC10-219	ENST00000497483	FBXO3	Q9UK99	471 aa		31.03	■■■□□ 2.56
HDAC10-219	ENST00000497483	SPDYE2B	A6NHP3	402 aa		31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483		F8W031	263 aa	Predicted RBP	31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483	SPDYE6	P0CI01	402 aa		31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483	PUM3	Q15397	648 aa	Known RBP	31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483	CFAP100	Q494V2	611 aa		31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483	INTS3	Q68E01	1043 aa	Known RBP	31.02	■■■□□ 2.56
HDAC10-219	ENST00000497483	FGFR2	P21802	821 aa		31.01	■■■□□ 2.55
HDAC10-219	ENST00000497483	CAVIN4	Q5BKX8	364 aa		31.01	■■■□□ 2.55
HDAC10-219	ENST00000497483	PRAMEF18	Q5VWM3	479 aa		31.01	■■■□□ 2.55
HDAC10-219	ENST00000497483	VPS37D	Q86XT2	251 aa		31	■■■□□ 2.55
HDAC10-219	ENST00000497483	RASAL3	Q86YV0	1011 aa		31	■■■□□ 2.55
HDAC10-219	ENST00000497483	PPP2R3B	Q9Y5P8	575 aa		31	■■■□□ 2.55
HDAC10-219	ENST00000497483	MYO1B	O43795	1136 aa		30.99	■■■□□ 2.55
HDAC10-219	ENST00000497483	PCDHAC2	Q9Y5I4	1007 aa		30.99	■■■□□ 2.55
HDAC10-219	ENST00000497483	LRRFIP2	Q9Y608	721 aa	Known RBP	30.99	■■■□□ 2.55
HDAC10-219	ENST00000497483	CIAO1	O76071	339 aa		30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	IFIT1	P09914	478 aa	Known RBP	30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	KIF23	Q02241	960 aa	Predicted RBP	30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	ATG9A	Q7Z3C6	839 aa		30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	MEIS3	Q99687	375 aa		30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	SERPINA10	Q9UK55	444 aa		30.98	■■■□□ 2.55
HDAC10-219	ENST00000497483	IPO8	O15397	1037 aa	Known RBP	30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	MOB2	Q70IA6	237 aa		30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	TBC1D22A	Q8WUA7	517 aa		30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	PRMT6	Q96LA8	375 aa	Predicted RBP	30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	DEFB129	Q9H1M3	183 aa		30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	LAMB1	P07942	1786 aa		30.97	■■■□□ 2.55
HDAC10-219	ENST00000497483	SSC5D	A1L4H1	1573 aa		30.96	■■■□□ 2.55
HDAC10-219	ENST00000497483	HNRNPU	Q00839	825 aa	Known RBP eCLIP	30.96	■■■□□ 2.55
HDAC10-219	ENST00000497483	SAGE1	Q9NXZ1	904 aa		30.96	■■■□□ 2.55
HDAC10-219	ENST00000497483	TSKS	Q9UJT2	592 aa		30.96	■■■□□ 2.55
HDAC10-219	ENST00000497483	TTF2	Q9UNY4	1162 aa	Known RBP	30.96	■■■□□ 2.55
HDAC10-219	ENST00000497483	TRIM27	P14373	513 aa		30.95	■■■□□ 2.55
HDAC10-219	ENST00000497483	REM2	Q8IYK8	340 aa	Predicted RBP	30.95	■■■□□ 2.55
HDAC10-219	ENST00000497483	CASP8AP2	Q9UKL3	1982 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	UBE2Q2L	H0YL09	131 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	GNAI3	P08754	354 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	SLC5A1	P13866	664 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	ATF7IP	Q6VMQ6	1270 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	LPIN2	Q92539	896 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	AOX1	Q06278	1338 aa		30.94	■■■□□ 2.54
HDAC10-219	ENST00000497483	CLRN2	A0PK11	232 aa		30.93	■■■□□ 2.54
HDAC10-219	ENST00000497483	BCAM	P50895	628 aa		30.93	■■■□□ 2.54
HDAC10-219	ENST00000497483	RBM5	P52756	815 aa	Known RBP eCLIP	30.93	■■■□□ 2.54
HDAC10-219	ENST00000497483	TTLL12	Q14166	644 aa	Predicted RBP	30.93	■■■□□ 2.54
HDAC10-219	ENST00000497483	ARMC9	Q7Z3E5	817 aa		30.93	■■■□□ 2.54
HDAC10-219	ENST00000497483	FRAT2	O75474	233 aa	Predicted RBP	30.92	■■■□□ 2.54
HDAC10-219	ENST00000497483	BCAR3	O75815	825 aa		30.92	■■■□□ 2.54
HDAC10-219	ENST00000497483	COPRS	Q9NQ92	184 aa		30.92	■■■□□ 2.54
HDAC10-219	ENST00000497483	HDLBP	Q00341	1268 aa	Known RBP	30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	CHAF1A	Q13111	956 aa	Predicted RBP	30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	MTX1	Q13505	466 aa		30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	SPDYE2	Q495Y8	402 aa		30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	CSRNP1	Q96S65	589 aa		30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	SIL1	Q9H173	461 aa		30.91	■■■□□ 2.54
HDAC10-219	ENST00000497483	IL15	P40933	162 aa	Predicted RBP	30.9	■■■□□ 2.54
HDAC10-219	ENST00000497483	TNFAIP1	Q13829	316 aa		30.9	■■■□□ 2.54
HDAC10-219	ENST00000497483	MAP3K11	Q16584	847 aa		30.9	■■■□□ 2.54
HDAC10-219	ENST00000497483	VEZT	Q9HBM0	779 aa		30.9	■■■□□ 2.54
HDAC10-219	ENST00000497483	SUGT1	Q9Y2Z0	365 aa		30.9	■■■□□ 2.54
HDAC10-219	ENST00000497483	OTOF	Q9HC10	1997 aa		30.89	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms