RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
ATG4B-224ENST00000494132 GNAI2P04899 355 aa18.32■□□□□ 0.52
ATG4B-224ENST00000494132 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-224ENST00000494132 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
ATG4B-224ENST00000494132 TDRD7Q8NHU6 1098 aaKnown RBP18.32■□□□□ 0.52
ATG4B-224ENST00000494132 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
ATG4B-224ENST00000494132 PCDHAC2Q9Y5I4 1007 aa18.32■□□□□ 0.52
ATG4B-224ENST00000494132 FGFR2P21802 821 aa18.31■□□□□ 0.52
ATG4B-224ENST00000494132 BCAMP50895 628 aa18.31■□□□□ 0.52
ATG4B-224ENST00000494132 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-224ENST00000494132 GRM1Q13255 1194 aa18.31■□□□□ 0.52
ATG4B-224ENST00000494132 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
ATG4B-224ENST00000494132 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
ATG4B-224ENST00000494132 PNMA6EA0A0J9YXQ4 647 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 WNT10BO00744 389 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 VEGFBP49765 207 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 DEFB115Q30KQ5 88 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 SULF1Q8IWU6 871 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
ATG4B-224ENST00000494132 RASSF10A6NK89 507 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 CIAO1O76071 339 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
ATG4B-224ENST00000494132 SLC5A1P13866 664 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 CEP126Q9P2H0 1117 aa18.29■□□□□ 0.52
ATG4B-224ENST00000494132 FAM205AQ6ZU69 1335 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 FRAT2O75474 233 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-224ENST00000494132 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-224ENST00000494132 MTX1Q13505 466 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 GRIK5Q16478 980 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 PRAMEF18Q5VWM3 479 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 TLL2Q9Y6L7 1015 aa18.28■□□□□ 0.52
ATG4B-224ENST00000494132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-224ENST00000494132 AOX1Q06278 1338 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 PCNTO95613 3336 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 CFAP100Q494V2 611 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 LPIN2Q92539 896 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 CDCA5Q96FF9 252 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.52
ATG4B-224ENST00000494132 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
ATG4B-224ENST00000494132 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-224ENST00000494132 ZBTB7BO15156 539 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-224ENST00000494132 ADORA1P30542 326 aa18.26■□□□□ 0.51
ATG4B-224ENST00000494132 TFCP2Q12800 502 aa18.26■□□□□ 0.51
ATG4B-224ENST00000494132 DLGAP5Q15398 846 aa18.26■□□□□ 0.51
ATG4B-224ENST00000494132 SAPCD2Q86UD0 394 aa18.26■□□□□ 0.51
ATG4B-224ENST00000494132 ZBED3Q96IU2 234 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-224ENST00000494132 TTF2Q9UNY4 1162 aaKnown RBP18.26■□□□□ 0.51
ATG4B-224ENST00000494132 RBM5P52756 815 aaKnown RBP eCLIP18.25■□□□□ 0.519e-12■■□□□ 12.4
ATG4B-224ENST00000494132 FKBP1AP62942 108 aaKnown RBP18.25■□□□□ 0.51
ATG4B-224ENST00000494132 GBA2Q9HCG7 927 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-224ENST00000494132 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
ATG4B-224ENST00000494132 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
ATG4B-224ENST00000494132 CLRN2A0PK11 232 aa18.24■□□□□ 0.51
ATG4B-224ENST00000494132 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
ATG4B-224ENST00000494132 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
ATG4B-224ENST00000494132 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
ATG4B-224ENST00000494132 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
ATG4B-224ENST00000494132 PHKA1P46020 1223 aa18.23■□□□□ 0.51
ATG4B-224ENST00000494132 HUNKP57058 714 aa18.23■□□□□ 0.51
ATG4B-224ENST00000494132 TIMM10P62072 90 aa18.23■□□□□ 0.51
ATG4B-224ENST00000494132 PRMT6Q96LA8 375 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-224ENST00000494132 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
ATG4B-224ENST00000494132 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
ATG4B-224ENST00000494132 AOC2O75106 756 aa18.22■□□□□ 0.51
ATG4B-224ENST00000494132 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
ATG4B-224ENST00000494132 PAPPA2Q9BXP8 1791 aa18.22■□□□□ 0.51
ATG4B-224ENST00000494132 A0A1B0GUL7 405 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 G3BP1Q13283 466 aaKnown RBP eCLIP18.21■□□□□ 0.51
ATG4B-224ENST00000494132 POLA2Q14181 598 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 MOB2Q70IA6 237 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 C2orf69Q8N8R5 385 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 NEUROD6Q96NK8 337 aa18.21■□□□□ 0.51
ATG4B-224ENST00000494132 AK9Q5TCS8 1911 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 CRKP46108 304 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 MMP14P50281 582 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-224ENST00000494132 PRKG1Q13976 671 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 APOBEC3FQ8IUX4 373 aaKnown RBP18.2■□□□□ 0.5
ATG4B-224ENST00000494132 SSH3Q8TE77 659 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
ATG4B-224ENST00000494132 MYO5AQ9Y4I1 1855 aaKnown RBP18.2■□□□□ 0.5
ATG4B-224ENST00000494132 ECE1P42892 770 aa18.19■□□□□ 0.5
ATG4B-224ENST00000494132 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
ATG4B-224ENST00000494132 TDRD3Q9H7E2 651 aaKnown RBP18.19■□□□□ 0.5
ATG4B-224ENST00000494132 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
ATG4B-224ENST00000494132 MYO1BO43795 1136 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms