RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 PCDHGC3Q9UN70 934 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 VIRMAQ69YN4 1812 aaKnown RBP9.79□□□□□ -0.84
RBM39-238ENST00000493853 UBN2Q6ZU65 1347 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 NTSR2O95665 410 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 HOXA10P31260 410 aaPredicted RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 CALD1Q05682 793 aaKnown RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 PROSER3Q2NL68 480 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 LARGE2Q8N3Y3 721 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 PSMD1Q99460 953 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 PRKRIP1Q9H875 184 aaPredicted RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 DDX21Q9NR30 783 aaKnown RBP eCLIP9.78□□□□□ -0.84
RBM39-238ENST00000493853 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
RBM39-238ENST00000493853 HACL1Q9UJ83 578 aa9.78□□□□□ -0.84
RBM39-238ENST00000493853 IBTKQ9P2D0 1353 aaPredicted RBP9.77□□□□□ -0.84
RBM39-238ENST00000493853 DXOO77932 396 aaKnown RBP9.77□□□□□ -0.85
RBM39-238ENST00000493853 TCIRG1Q13488 830 aa9.77□□□□□ -0.85
RBM39-238ENST00000493853 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
RBM39-238ENST00000493853 LDHDQ86WU2 507 aa9.77□□□□□ -0.85
RBM39-238ENST00000493853 TAF1DQ9H5J8 278 aaPredicted RBP9.77□□□□□ -0.85
RBM39-238ENST00000493853 DBF4Q9UBU7 674 aaPredicted RBP9.77□□□□□ -0.85
RBM39-238ENST00000493853 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
RBM39-238ENST00000493853 ABCC12Q96J65 1359 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 BBOX1O75936 387 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 HOXB7P09629 217 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 HCLS1P14317 486 aaPredicted RBP9.76□□□□□ -0.85
RBM39-238ENST00000493853 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
RBM39-238ENST00000493853 EPHX2P34913 555 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 KRT24Q2M2I5 525 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 SLC10A5Q5PT55 438 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 TRIM67Q6ZTA4 783 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
RBM39-238ENST00000493853 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 PNMA8AQ86V59 439 aaPredicted RBP9.76□□□□□ -0.85
RBM39-238ENST00000493853 NLRP10Q86W26 655 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 NIM1KQ8IY84 436 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 GPC2Q8N158 579 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
RBM39-238ENST00000493853 FZD9O00144 591 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 TNFRSF10AO00220 468 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 APAF1O14727 1248 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 PPIP5K2O43314 1243 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 GNAI1P63096 354 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 FOXC1Q12948 553 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 DUSP27Q5VZP5 1158 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 JMYQ8N9B5 988 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 SUPT20HQ8NEM7 779 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 PLBD2Q8NHP8 589 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 ATP6V0A2Q9Y487 856 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 SH3TC1Q8TE82 1336 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 ZNF541Q9H0D2 1346 aa9.75□□□□□ -0.85
RBM39-238ENST00000493853 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
RBM39-238ENST00000493853 DLEC1Q9Y238 1755 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 JUNDP17535 347 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 DPP8Q6V1X1 898 aaPredicted RBP9.74□□□□□ -0.85
RBM39-238ENST00000493853 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 SP8Q8IXZ3 490 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 MPNDQ8N594 471 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 ANKRD31Q8N7Z5 1873 aa9.74□□□□□ -0.85
RBM39-238ENST00000493853 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 SLX4Q8IY92 1834 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 SBF1O95248 1867 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 ATP5J2-PTCD1G3V325 749 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
RBM39-238ENST00000493853 HSP90B1P14625 803 aaKnown RBP9.73□□□□□ -0.85
RBM39-238ENST00000493853 AOC3Q16853 763 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 CNTROBQ8N137 903 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 IFT57Q9NWB7 429 aa9.73□□□□□ -0.85
RBM39-238ENST00000493853 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
RBM39-238ENST00000493853 TMEM88BA6NKF7 163 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 GDF9O60383 454 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 PRR20EP86478 221 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 PRR20CP86479 221 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 PRR20DP86480 221 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 PRR20BP86481 221 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 PRR20AP86496 221 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 GRAPQ13588 217 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 MTMR2Q13614 643 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
RBM39-238ENST00000493853 RSBN1LQ6PCB5 846 aaPredicted RBP9.72□□□□□ -0.85
RBM39-238ENST00000493853 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 TMC4Q7Z404 712 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 GRAPLQ8TC17 118 aaPredicted RBP9.72□□□□□ -0.85
RBM39-238ENST00000493853 FAM89AQ96GI7 184 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 ZNRF3Q9ULT6 936 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
RBM39-238ENST00000493853 ABCC4O15439 1325 aa9.72□□□□□ -0.85
RBM39-238ENST00000493853 WDR90Q96KV7 1748 aa9.71□□□□□ -0.85
RBM39-238ENST00000493853 KDM3BQ7LBC6 1761 aa9.71□□□□□ -0.85
RBM39-238ENST00000493853 DDX58O95786 925 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms