RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 VPS37DQ86XT2 251 aa23.07■■□□□ 1.28
NDUFB4-204ENST00000491335 IQSEC3Q9UPP2 1182 aaPredicted RBP23.07■■□□□ 1.28
NDUFB4-204ENST00000491335 FAM205AQ6ZU69 1335 aa23.07■■□□□ 1.28
NDUFB4-204ENST00000491335 PNMA6EA0A0J9YXQ4 647 aa23.06■■□□□ 1.28
NDUFB4-204ENST00000491335 BCAMP50895 628 aa23.06■■□□□ 1.28
NDUFB4-204ENST00000491335 GGA3Q9NZ52 723 aa23.06■■□□□ 1.28
NDUFB4-204ENST00000491335 SLC5A1P13866 664 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 MMP14P50281 582 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 FKBP1AP62942 108 aaKnown RBP23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 KRT26Q7Z3Y9 468 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 LPIN2Q92539 896 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 C1orf115Q9H7X2 142 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 MKRN1Q9UHC7 482 aaKnown RBP23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 HDAC9Q9UKV0 1011 aa23.05■■□□□ 1.28
NDUFB4-204ENST00000491335 MS4A1P11836 297 aa23.04■■□□□ 1.28
NDUFB4-204ENST00000491335 ATP2B3Q16720 1220 aa23.04■■□□□ 1.28
NDUFB4-204ENST00000491335 ANGEL2Q5VTE6 544 aaKnown RBP23.04■■□□□ 1.28
NDUFB4-204ENST00000491335 ADM5C9JUS6 153 aa23.03■■□□□ 1.28
NDUFB4-204ENST00000491335 F8W031 263 aaPredicted RBP23.03■■□□□ 1.28
NDUFB4-204ENST00000491335 CELF2O95319 508 aaKnown RBP23.03■■□□□ 1.28
NDUFB4-204ENST00000491335 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
NDUFB4-204ENST00000491335 WNT10BO00744 389 aa23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 MFSD14BQ5SR56 506 aa23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 SULF1Q8IWU6 871 aa23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 ZNF408Q9H9D4 720 aa23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 ABT1Q9ULW3 272 aaKnown RBP23.02■■□□□ 1.28
NDUFB4-204ENST00000491335 CHAF1AQ13111 956 aaPredicted RBP23.01■■□□□ 1.27
NDUFB4-204ENST00000491335 POLA2Q14181 598 aa23.01■■□□□ 1.27
NDUFB4-204ENST00000491335 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
NDUFB4-204ENST00000491335 YTHDC1Q96MU7 727 aaKnown RBP23.01■■□□□ 1.27
NDUFB4-204ENST00000491335 CNTNAP1P78357 1384 aa23.01■■□□□ 1.27
NDUFB4-204ENST00000491335 TFCP2Q12800 502 aa23■■□□□ 1.27
NDUFB4-204ENST00000491335 DEFB115Q30KQ5 88 aa23■■□□□ 1.27
NDUFB4-204ENST00000491335 ZBED3Q96IU2 234 aaPredicted RBP23■■□□□ 1.27
NDUFB4-204ENST00000491335 SCAF8Q9UPN6 1271 aaKnown RBP23■■□□□ 1.27
NDUFB4-204ENST00000491335 TIMM10P62072 90 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 G3BP1Q13283 466 aaKnown RBP eCLIP22.99■■□□□ 1.277e-6■□□□□ 8.9
NDUFB4-204ENST00000491335 DLGAP5Q15398 846 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 SSH3Q8TE77 659 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 COG6Q9Y2V7 657 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 PCDHAC2Q9Y5I4 1007 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 PITPNM2Q9BZ72 1349 aa22.99■■□□□ 1.27
NDUFB4-204ENST00000491335 RASSF10A6NK89 507 aa22.98■■□□□ 1.27
NDUFB4-204ENST00000491335 ADORA1P30542 326 aa22.98■■□□□ 1.27
NDUFB4-204ENST00000491335 MVPQ14764 893 aaKnown RBP22.98■■□□□ 1.27
NDUFB4-204ENST00000491335 VEGFBP49765 207 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 GRIK5Q16478 980 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 CFAP100Q494V2 611 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 MTMR14Q8NCE2 650 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 TTF2Q9UNY4 1162 aaKnown RBP22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 AKAP2Q9Y2D5 859 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 TLL2Q9Y6L7 1015 aa22.97■■□□□ 1.27
NDUFB4-204ENST00000491335 MYH13Q9UKX3 1938 aa22.96■■□□□ 1.27
NDUFB4-204ENST00000491335 TBC1D22AQ8WUA7 517 aa22.96■■□□□ 1.27
NDUFB4-204ENST00000491335 CDCA5Q96FF9 252 aa22.96■■□□□ 1.27
NDUFB4-204ENST00000491335 A0A1B0GUL7 405 aa22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 PHKA1P46020 1223 aa22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 RBM5P52756 815 aaKnown RBP eCLIP22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 SAPCD2Q86UD0 394 aa22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 PRMT6Q96LA8 375 aaPredicted RBP22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 GNL3LQ9NVN8 582 aaKnown RBP22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 DDX19BQ9UMR2 479 aa22.95■■□□□ 1.26
NDUFB4-204ENST00000491335 ARAP2Q8WZ64 1704 aa22.94■■□□□ 1.26
NDUFB4-204ENST00000491335 SURF6O75683 361 aaKnown RBP22.94■■□□□ 1.26
NDUFB4-204ENST00000491335 C20orf194Q5TEA3 1177 aa22.94■■□□□ 1.26
NDUFB4-204ENST00000491335 CEP85Q6P2H3 762 aa22.94■■□□□ 1.26
NDUFB4-204ENST00000491335 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.94■■□□□ 1.26
NDUFB4-204ENST00000491335 SPDYE2BA6NHP3 402 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 SPDYE6P0CI01 402 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 PRAMEF18Q5VWM3 479 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 CCDC102BQ68D86 513 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 WDR66Q8TBY9 1149 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 XAGE2Q96GT9 111 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 GBA2Q9HCG7 927 aaPredicted RBP22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 SERPINA10Q9UK55 444 aa22.93■■□□□ 1.26
NDUFB4-204ENST00000491335 AOX1Q06278 1338 aa22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 PAXIP1Q6ZW49 1069 aaPredicted RBP22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 ZBTB40Q9NUA8 1239 aa22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 NOP58Q9Y2X3 529 aaKnown RBP22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 ECM29Q5VYK3 1845 aa22.92■■□□□ 1.26
NDUFB4-204ENST00000491335 WDR33Q9C0J8 1336 aaKnown RBP22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 CYP4F22Q6NT55 531 aa22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 APOBEC3FQ8IUX4 373 aaKnown RBP22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 C2orf69Q8N8R5 385 aa22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 DENND2AQ9ULE3 1009 aa22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 COL1A1P02452 1464 aaPredicted RBP22.91■■□□□ 1.26
NDUFB4-204ENST00000491335 CLRN2A0PK11 232 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 SEMA3EO15041 775 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 MYO1BO43795 1136 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 CRKP46108 304 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 CAPNS2Q96L46 248 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 SUGT1Q9Y2Z0 365 aa22.9■■□□□ 1.26
NDUFB4-204ENST00000491335 HUNKP57058 714 aa22.89■■□□□ 1.25
NDUFB4-204ENST00000491335 HDLBPQ00341 1268 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms