RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 BABAM1Q9NWV8 329 aa17.86■□□□□ 0.45
EXOSC3-207ENST00000490516 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
EXOSC3-207ENST00000490516 ZNF804BA4D1E1 1349 aa17.86■□□□□ 0.45
EXOSC3-207ENST00000490516 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
EXOSC3-207ENST00000490516 MYH3P11055 1940 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 KLRK1P26718 216 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 AOX1Q06278 1338 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 HDGFL1Q5TGJ6 251 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 Q7L0L9 218 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 STAP2Q9UGK3 403 aa17.85■□□□□ 0.45
EXOSC3-207ENST00000490516 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 GJA8P48165 433 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 KIF22Q14807 665 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 DEFB123Q8N688 67 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 NKX2-3Q8TAU0 364 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
EXOSC3-207ENST00000490516 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-207ENST00000490516 RIPK4P57078 832 aa17.83■□□□□ 0.44
EXOSC3-207ENST00000490516 DBF4Q9UBU7 674 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-207ENST00000490516 TLR2O60603 784 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 GJB1P08034 283 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 CCL5P13501 91 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 GTF2A2P52657 109 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 RASA3Q14644 834 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 CERS5Q8N5B7 392 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 PRMT6Q96LA8 375 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 CDC5LQ99459 802 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 MYD88Q99836 296 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 STXBP5LQ9Y2K9 1186 aa17.82■□□□□ 0.44
EXOSC3-207ENST00000490516 F8W031 263 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 GNRH1P01148 92 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 CTGFP29279 349 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 PRMT2P55345 433 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 CFAP100Q494V2 611 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 RNF208Q9H0X6 261 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
EXOSC3-207ENST00000490516 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 MYO1BO43795 1136 aa17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 EVI5O60447 810 aa17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 FARP2O94887 1054 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 GRK4P32298 578 aa17.8■□□□□ 0.44
EXOSC3-207ENST00000490516 VGLL4Q14135 290 aa17.79■□□□□ 0.44
EXOSC3-207ENST00000490516 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
EXOSC3-207ENST00000490516 CHL1O00533 1208 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 CTSWP56202 376 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 GPR153Q6NV75 609 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 CCDC191Q8NCU4 936 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 TRIM47Q96LD4 638 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 GREM2Q9H772 168 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 MTMR10Q9NXD2 777 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 SRRDQ9UH36 339 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 RIPOR2Q9Y4F9 1068 aa17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-207ENST00000490516 BTBD19C9JJ37 291 aa17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 WDHD1O75717 1129 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 PSMC4P43686 418 aa17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 CD209Q9NNX6 404 aa17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 CWC25Q9NXE8 425 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 BIN2Q9UBW5 565 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-207ENST00000490516 MGAMO43451 1857 aa17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 ARAP2Q8WZ64 1704 aa17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 OSBPP22059 807 aa17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
EXOSC3-207ENST00000490516 HOXB7P09629 217 aa17.75■□□□□ 0.43
EXOSC3-207ENST00000490516 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.431e-14■■■■■ 51.6
EXOSC3-207ENST00000490516 MAP3K9P80192 1104 aa17.75■□□□□ 0.43
EXOSC3-207ENST00000490516 UNC93B1Q9H1C4 597 aa17.75■□□□□ 0.43
EXOSC3-207ENST00000490516 CPA4Q9UI42 421 aa17.75■□□□□ 0.43
EXOSC3-207ENST00000490516 MYPNQ86TC9 1320 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 CETPP11597 493 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 C17orf99Q6UX52 265 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 TEPSINQ96N21 525 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 GDF15Q99988 308 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 CSADQ9Y600 493 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 VCANP13611 3396 aa17.74■□□□□ 0.43
EXOSC3-207ENST00000490516 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 SGPL1O95470 568 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 BMP8BP34820 402 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 UBXN2AP68543 259 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 ZCCHC17Q9NP64 241 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms