RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
RBM39-236ENST00000490484 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
RBM39-236ENST00000490484 API5Q9BZZ5 524 aaKnown RBP12.99□□□□□ -0.33
RBM39-236ENST00000490484 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
RBM39-236ENST00000490484 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
RBM39-236ENST00000490484 ECM29Q5VYK3 1845 aa12.98□□□□□ -0.33
RBM39-236ENST00000490484 CAPN15O75808 1086 aa12.98□□□□□ -0.33
RBM39-236ENST00000490484 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
RBM39-236ENST00000490484 HIBADHP31937 336 aaKnown RBP12.98□□□□□ -0.33
RBM39-236ENST00000490484 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
RBM39-236ENST00000490484 NOGQ13253 232 aa12.98□□□□□ -0.33
RBM39-236ENST00000490484 PRAMEF18Q5VWM3 479 aa12.98□□□□□ -0.33
RBM39-236ENST00000490484 FAM155AB1AL88 458 aaPredicted RBP12.97□□□□□ -0.33
RBM39-236ENST00000490484 MMP14P50281 582 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 ZNF157P51786 506 aaPredicted RBP12.97□□□□□ -0.33
RBM39-236ENST00000490484 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
RBM39-236ENST00000490484 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
RBM39-236ENST00000490484 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 ZBED3Q96IU2 234 aaPredicted RBP12.97□□□□□ -0.33
RBM39-236ENST00000490484 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
RBM39-236ENST00000490484 PDE8BO95263 885 aa12.96□□□□□ -0.33
RBM39-236ENST00000490484 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.33
RBM39-236ENST00000490484 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
RBM39-236ENST00000490484 TDRD7Q8NHU6 1098 aaKnown RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 FAM84BQ96KN1 310 aaPredicted RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 LRRFIP2Q9Y608 721 aaKnown RBP12.96□□□□□ -0.33
RBM39-236ENST00000490484 COL1A1P02452 1464 aaPredicted RBP12.96□□□□□ -0.34
RBM39-236ENST00000490484 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 CLRN2A0PK11 232 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 EYA2O00167 538 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 SLC10A3P09131 477 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 NF2P35240 595 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
RBM39-236ENST00000490484 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
RBM39-236ENST00000490484 FKBP1BP68106 108 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 PUM3Q15397 648 aaKnown RBP12.95□□□□□ -0.34
RBM39-236ENST00000490484 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 CCDC102AQ96A19 550 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 MEIS3Q99687 375 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 SIL1Q9H173 461 aa12.95□□□□□ -0.34
RBM39-236ENST00000490484 AOX1Q06278 1338 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 CA12O43570 354 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 MYO1BO43795 1136 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
RBM39-236ENST00000490484 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
RBM39-236ENST00000490484 CHAF1AQ13111 956 aaPredicted RBP12.94□□□□□ -0.34
RBM39-236ENST00000490484 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 FRAT1Q92837 279 aaPredicted RBP12.94□□□□□ -0.34
RBM39-236ENST00000490484 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
RBM39-236ENST00000490484 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
RBM39-236ENST00000490484 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 BCAR3O75815 825 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
RBM39-236ENST00000490484 TRIM27P14373 513 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 KIF23Q02241 960 aaPredicted RBP12.93□□□□□ -0.34
RBM39-236ENST00000490484 PRKG1Q13976 671 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
RBM39-236ENST00000490484 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 MYH13Q9UKX3 1938 aa12.93□□□□□ -0.34
RBM39-236ENST00000490484 SLC5A1P13866 664 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 FGFR2P21802 821 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 BCAMP50895 628 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
RBM39-236ENST00000490484 ATF7IPQ6VMQ6 1270 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 FZD1Q9UP38 647 aa12.92□□□□□ -0.34
RBM39-236ENST00000490484 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
RBM39-236ENST00000490484 CIAO1O76071 339 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 GRIK5Q16478 980 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 LPIN2Q92539 896 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 SERPINA10Q9UK55 444 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
RBM39-236ENST00000490484 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
RBM39-236ENST00000490484 CRKP46108 304 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
RBM39-236ENST00000490484 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 ARMC9Q7Z3E5 817 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 TBC1D22AQ8WUA7 517 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
RBM39-236ENST00000490484 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
RBM39-236ENST00000490484 SRGAP3O43295 1099 aa12.89□□□□□ -0.35
RBM39-236ENST00000490484 GNAI3P08754 354 aa12.89□□□□□ -0.35
RBM39-236ENST00000490484 RASA3Q14644 834 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms