RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MYO1BO43795 1136 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
SREBF1-215ENST00000487401 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 ARMC9Q7Z3E5 817 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 RASAL3Q86YV0 1011 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
SREBF1-215ENST00000487401 CSRNP1Q96S65 589 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 SAGE1Q9NXZ1 904 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 RIPOR2Q9Y4F9 1068 aa15.64■□□□□ 0.09
SREBF1-215ENST00000487401 TRPA1O75762 1119 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 GYG1P46976 350 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■□□□□ 9.6
SREBF1-215ENST00000487401 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 FAM84BQ96KN1 310 aaPredicted RBP15.63■□□□□ 0.09
SREBF1-215ENST00000487401 USP44Q9H0E7 712 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 DEFB129Q9H1M3 183 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 RNF186Q9NXI6 227 aa15.63■□□□□ 0.09
SREBF1-215ENST00000487401 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
SREBF1-215ENST00000487401 PRKG1Q13976 671 aa15.62■□□□□ 0.09
SREBF1-215ENST00000487401 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
SREBF1-215ENST00000487401 TDRD7Q8NHU6 1098 aaKnown RBP15.62■□□□□ 0.09
SREBF1-215ENST00000487401 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
SREBF1-215ENST00000487401 SCN9AQ15858 1988 aa15.62■□□□□ 0.09
SREBF1-215ENST00000487401 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
SREBF1-215ENST00000487401 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
SREBF1-215ENST00000487401 CAVIN4Q5BKX8 364 aa15.61■□□□□ 0.09
SREBF1-215ENST00000487401 MFSD14BQ5SR56 506 aa15.61■□□□□ 0.09
SREBF1-215ENST00000487401 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
SREBF1-215ENST00000487401 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
SREBF1-215ENST00000487401 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 CCDC85CA6NKD9 419 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 PRMT6Q96LA8 375 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-215ENST00000487401 MCOLN1Q9GZU1 580 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 NOB1Q9ULX3 412 aaKnown RBP15.6■□□□□ 0.09
SREBF1-215ENST00000487401 TTF2Q9UNY4 1162 aaKnown RBP15.6■□□□□ 0.09
SREBF1-215ENST00000487401 PCDHAC2Q9Y5I4 1007 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 PPP2R3BQ9Y5P8 575 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 TRPM7Q96QT4 1865 aa15.6■□□□□ 0.09
SREBF1-215ENST00000487401 PDE8BO95263 885 aa15.59■□□□□ 0.09
SREBF1-215ENST00000487401 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
SREBF1-215ENST00000487401 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-215ENST00000487401 DGKZQ13574 1117 aa15.59■□□□□ 0.09
SREBF1-215ENST00000487401 SUPT20HL1Q3ZLR7 823 aa15.59■□□□□ 0.09
SREBF1-215ENST00000487401 FBXO33Q7Z6M2 555 aa15.59■□□□□ 0.09
SREBF1-215ENST00000487401 KLHDC4Q8TBB5 520 aa15.59■□□□□ 0.09
SREBF1-215ENST00000487401 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
SREBF1-215ENST00000487401 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
SREBF1-215ENST00000487401 PPP1R12BO60237 982 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-215ENST00000487401 UBTFL1P0CB47 393 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-215ENST00000487401 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
SREBF1-215ENST00000487401 SLC10A4Q96EP9 437 aa15.58■□□□□ 0.08
SREBF1-215ENST00000487401 SERPINA10Q9UK55 444 aa15.58■□□□□ 0.08
SREBF1-215ENST00000487401 IQSEC3Q9UPP2 1182 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-215ENST00000487401 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.08
SREBF1-215ENST00000487401 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
SREBF1-215ENST00000487401 PUM3Q15397 648 aaKnown RBP15.57■□□□□ 0.08
SREBF1-215ENST00000487401 LDLRAD1Q5T700 205 aa15.57■□□□□ 0.08
SREBF1-215ENST00000487401 TBC1D22AQ8WUA7 517 aa15.57■□□□□ 0.08
SREBF1-215ENST00000487401 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-215ENST00000487401 EYA2O00167 538 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 BCAMP50895 628 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 SREBF2Q12772 1141 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 TNFAIP1Q13829 316 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 RASA3Q14644 834 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 VGLL2Q8N8G2 317 aa15.56■□□□□ 0.08
SREBF1-215ENST00000487401 ZNF70Q9UC06 446 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-215ENST00000487401 COL1A1P02452 1464 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-215ENST00000487401 CRKP46108 304 aa15.55■□□□□ 0.08
SREBF1-215ENST00000487401 TM4SF4P48230 202 aa15.55■□□□□ 0.08
SREBF1-215ENST00000487401 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
SREBF1-215ENST00000487401 TDRD3Q9H7E2 651 aaKnown RBP15.55■□□□□ 0.08
SREBF1-215ENST00000487401 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
SREBF1-215ENST00000487401 AOX1Q06278 1338 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 SLC5A1P13866 664 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
SREBF1-215ENST00000487401 RFX5P48382 616 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-215ENST00000487401 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
SREBF1-215ENST00000487401 MAP3K11Q16584 847 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 SPDYE2Q495Y8 402 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 NBPF12Q5TAG4 269 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-215ENST00000487401 SPRYD7Q5W111 196 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 LPIN2Q92539 896 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 MYH3P11055 1940 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 PAPPA2Q9BXP8 1791 aa15.54■□□□□ 0.08
SREBF1-215ENST00000487401 KIF16BQ96L93 1317 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 FGFR2P21802 821 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 TNNI2P48788 182 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 HDLBPQ00341 1268 aaKnown RBP15.53■□□□□ 0.08
SREBF1-215ENST00000487401 SIL1Q9H173 461 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 CEP126Q9P2H0 1117 aa15.53■□□□□ 0.08
SREBF1-215ENST00000487401 TCP10L2B9ZVM9 353 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 INHBEP58166 350 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 GRIK5Q16478 980 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms