RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TTLL12Q14166 644 aaPredicted RBP30.94■■■□□ 2.54
LIME1-206ENST00000487026 RASAL3Q86YV0 1011 aa30.94■■■□□ 2.54
LIME1-206ENST00000487026 ANKRD44Q8N8A2 993 aa30.94■■■□□ 2.54
LIME1-206ENST00000487026 CSRNP1Q96S65 589 aa30.94■■■□□ 2.54
LIME1-206ENST00000487026 DLGAP5Q15398 846 aa30.93■■■□□ 2.54
LIME1-206ENST00000487026 RIPOR2Q9Y4F9 1068 aa30.93■■■□□ 2.54
LIME1-206ENST00000487026 PAPPA2Q9BXP8 1791 aa30.92■■■□□ 2.54
LIME1-206ENST00000487026 CASP8AP2Q9UKL3 1982 aa30.92■■■□□ 2.54
LIME1-206ENST00000487026 GYG1P46976 350 aa30.92■■■□□ 2.54
LIME1-206ENST00000487026 UBE4AQ14139 1066 aa30.92■■■□□ 2.54
LIME1-206ENST00000487026 RABL6Q3YEC7 729 aaPredicted RBP30.92■■■□□ 2.54
LIME1-206ENST00000487026 PRKG1Q13976 671 aa30.91■■■□□ 2.54
LIME1-206ENST00000487026 APOBEC3FQ8IUX4 373 aaKnown RBP30.91■■■□□ 2.54
LIME1-206ENST00000487026 USP44Q9H0E7 712 aa30.91■■■□□ 2.54
LIME1-206ENST00000487026 RNF186Q9NXI6 227 aa30.91■■■□□ 2.54
LIME1-206ENST00000487026 TRPA1O75762 1119 aa30.9■■■□□ 2.54
LIME1-206ENST00000487026 LRRC24Q50LG9 513 aa30.9■■■□□ 2.54
LIME1-206ENST00000487026 FAM84BQ96KN1 310 aaPredicted RBP30.9■■■□□ 2.54
LIME1-206ENST00000487026 HIBADHP31937 336 aaKnown RBP30.89■■■□□ 2.54
LIME1-206ENST00000487026 NF2P35240 595 aa30.89■■■□□ 2.54
LIME1-206ENST00000487026 ALDH1L2Q3SY69 923 aa30.89■■■□□ 2.54
LIME1-206ENST00000487026 CFAP100Q494V2 611 aa30.89■■■□□ 2.54
LIME1-206ENST00000487026 TRMT2AQ8IZ69 625 aaKnown RBP30.89■■■□□ 2.54
LIME1-206ENST00000487026 KLHDC4Q8TBB5 520 aa30.89■■■□□ 2.54
LIME1-206ENST00000487026 SMC4Q9NTJ3 1288 aa30.89■■■□□ 2.54
LIME1-206ENST00000487026 FKBP1AP62942 108 aaKnown RBP30.88■■■□□ 2.53
LIME1-206ENST00000487026 MTMR14Q8NCE2 650 aa30.88■■■□□ 2.53
LIME1-206ENST00000487026 TDRD7Q8NHU6 1098 aaKnown RBP30.88■■■□□ 2.53
LIME1-206ENST00000487026 MROH5Q6ZUA9 1318 aa30.88■■■□□ 2.53
LIME1-206ENST00000487026 PRMT6Q96LA8 375 aaPredicted RBP30.87■■■□□ 2.53
LIME1-206ENST00000487026 CLRN2A0PK11 232 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 DEFB129Q9H1M3 183 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 SAGE1Q9NXZ1 904 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 FZD1Q9UP38 647 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 AOX1Q06278 1338 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 FAM205AQ6ZU69 1335 aa30.86■■■□□ 2.53
LIME1-206ENST00000487026 RBM5P52756 815 aaKnown RBP eCLIP30.85■■■□□ 2.53
LIME1-206ENST00000487026 METTL24Q5JXM2 366 aa30.85■■■□□ 2.53
LIME1-206ENST00000487026 MCOLN1Q9GZU1 580 aa30.85■■■□□ 2.53
LIME1-206ENST00000487026 SPDYE2BA6NHP3 402 aa30.84■■■□□ 2.53
LIME1-206ENST00000487026 SPDYE6P0CI01 402 aa30.84■■■□□ 2.53
LIME1-206ENST00000487026 PTPN12Q05209 780 aaKnown RBP30.84■■■□□ 2.53
LIME1-206ENST00000487026 MFSD14BQ5SR56 506 aa30.84■■■□□ 2.53
LIME1-206ENST00000487026 IQSEC3Q9UPP2 1182 aaPredicted RBP30.84■■■□□ 2.53
LIME1-206ENST00000487026 CCER2I3L3R5 266 aa30.83■■■□□ 2.53
LIME1-206ENST00000487026 MKRN3Q13064 507 aaKnown RBP30.83■■■□□ 2.53
LIME1-206ENST00000487026 CCDC85CA6NKD9 419 aa30.82■■■□□ 2.52
LIME1-206ENST00000487026 DGKZQ13574 1117 aa30.82■■■□□ 2.52
LIME1-206ENST00000487026 ARMC9Q7Z3E5 817 aa30.82■■■□□ 2.52
LIME1-206ENST00000487026 VEZTQ9HBM0 779 aa30.82■■■□□ 2.52
LIME1-206ENST00000487026 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.82■■■□□ 2.52
LIME1-206ENST00000487026 NOB1Q9ULX3 412 aaKnown RBP30.82■■■□□ 2.52
LIME1-206ENST00000487026 AKAP11Q9UKA4 1901 aa30.81■■■□□ 2.52
LIME1-206ENST00000487026 MYO1BO43795 1136 aa30.81■■■□□ 2.52
LIME1-206ENST00000487026 FBXO33Q7Z6M2 555 aa30.81■■■□□ 2.52
LIME1-206ENST00000487026 REM2Q8IYK8 340 aaPredicted RBP30.81■■■□□ 2.52
LIME1-206ENST00000487026 ANGEL1Q9UNK9 670 aaKnown RBP30.81■■■□□ 2.52
LIME1-206ENST00000487026 TTF2Q9UNY4 1162 aaKnown RBP30.81■■■□□ 2.52
LIME1-206ENST00000487026 PDE8BO95263 885 aa30.8■■■□□ 2.52
LIME1-206ENST00000487026 VPS37DQ86XT2 251 aa30.8■■■□□ 2.52
LIME1-206ENST00000487026 VGLL2Q8N8G2 317 aa30.8■■■□□ 2.52
LIME1-206ENST00000487026 CHAF1AQ13111 956 aaPredicted RBP30.78■■■□□ 2.52
LIME1-206ENST00000487026 GRIK5Q16478 980 aa30.78■■■□□ 2.52
LIME1-206ENST00000487026 LDLRAD1Q5T700 205 aa30.78■■■□□ 2.52
LIME1-206ENST00000487026 RFX5P48382 616 aaPredicted RBP30.77■■■□□ 2.52
LIME1-206ENST00000487026 BCAMP50895 628 aa30.77■■■□□ 2.52
LIME1-206ENST00000487026 FRAT2O75474 233 aaPredicted RBP30.76■■■□□ 2.51
LIME1-206ENST00000487026 CT47B1P0C2W7 299 aaPredicted RBP30.76■■■□□ 2.51
LIME1-206ENST00000487026 CAVIN4Q5BKX8 364 aa30.76■■■□□ 2.51
LIME1-206ENST00000487026 NBPF12Q5TAG4 269 aaPredicted RBP30.76■■■□□ 2.51
LIME1-206ENST00000487026 COL1A1P02452 1464 aaPredicted RBP30.76■■■□□ 2.51
LIME1-206ENST00000487026 TDRD3Q9H7E2 651 aaKnown RBP30.75■■■□□ 2.51
LIME1-206ENST00000487026 SERPINA10Q9UK55 444 aa30.75■■■□□ 2.51
LIME1-206ENST00000487026 PPP2R3BQ9Y5P8 575 aa30.75■■■□□ 2.51
LIME1-206ENST00000487026 RASA3Q14644 834 aa30.74■■■□□ 2.51
LIME1-206ENST00000487026 ZNF70Q9UC06 446 aaPredicted RBP30.74■■■□□ 2.51
LIME1-206ENST00000487026 ECM29Q5VYK3 1845 aa30.74■■■□□ 2.51
LIME1-206ENST00000487026 SSC5DA1L4H1 1573 aa30.74■■■□□ 2.51
LIME1-206ENST00000487026 EYA2O00167 538 aa30.73■■■□□ 2.51
LIME1-206ENST00000487026 TBC1D8O95759 1140 aa30.73■■■□□ 2.51
LIME1-206ENST00000487026 UBTFL1P0CB47 393 aaPredicted RBP30.73■■■□□ 2.51
LIME1-206ENST00000487026 TM4SF4P48230 202 aa30.73■■■□□ 2.51
LIME1-206ENST00000487026 DZIP1LQ8IYY4 767 aaKnown RBP30.73■■■□□ 2.51
LIME1-206ENST00000487026 PPP1R12BO60237 982 aaPredicted RBP30.72■■■□□ 2.51
LIME1-206ENST00000487026 FGFR2P21802 821 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 CRKP46108 304 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 SUPT20HL1Q3ZLR7 823 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 SPDYE2Q495Y8 402 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 SLC10A4Q96EP9 437 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 CLMNQ96JQ2 1002 aa30.72■■■□□ 2.51
LIME1-206ENST00000487026 API5Q9BZZ5 524 aaKnown RBP30.72■■■□□ 2.51
LIME1-206ENST00000487026 RARSP54136 660 aaKnown RBP30.71■■■□□ 2.51
LIME1-206ENST00000487026 PUM3Q15397 648 aaKnown RBP30.71■■■□□ 2.51
LIME1-206ENST00000487026 MAP3K11Q16584 847 aa30.71■■■□□ 2.51
LIME1-206ENST00000487026 SPRYD7Q5W111 196 aa30.71■■■□□ 2.51
LIME1-206ENST00000487026 IFIT1P09914 478 aaKnown RBP30.7■■■□□ 2.51
LIME1-206ENST00000487026 ATG9AQ7Z3C6 839 aa30.7■■■□□ 2.51
LIME1-206ENST00000487026 SIL1Q9H173 461 aa30.7■■■□□ 2.51
LIME1-206ENST00000487026 USP2O75604 605 aaPredicted RBP30.69■■■□□ 2.5
LIME1-206ENST00000487026 LRRFIP2Q9Y608 721 aaKnown RBP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms