RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 BAG6P46379 1132 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 DGKGP49619 791 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 CABP4P57796 275 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 MSL1Q68DK7 614 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 VN1R5Q7Z5H4 357 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
RTN4-214ENST00000486085 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
RTN4-214ENST00000486085 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
RTN4-214ENST00000486085 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
RTN4-214ENST00000486085 PTPN12Q05209 780 aaKnown RBP9.93□□□□□ -0.82
RTN4-214ENST00000486085 TXNDC11Q6PKC3 985 aa9.93□□□□□ -0.82
RTN4-214ENST00000486085 DMRTC2Q8IXT2 367 aaPredicted RBP9.93□□□□□ -0.82
RTN4-214ENST00000486085 CLEC4MQ9H2X3 399 aaPredicted RBP9.93□□□□□ -0.82
RTN4-214ENST00000486085 ZFYVE1Q9HBF4 777 aa9.93□□□□□ -0.82
RTN4-214ENST00000486085 LINC01387J3KSC0 135 aa9.92□□□□□ -0.82
RTN4-214ENST00000486085 FBXO24O75426 580 aa9.92□□□□□ -0.82
RTN4-214ENST00000486085 NID1P14543 1247 aa9.92□□□□□ -0.82
RTN4-214ENST00000486085 ZNF157P51786 506 aaPredicted RBP9.92□□□□□ -0.82
RTN4-214ENST00000486085 PCDH1Q08174 1060 aa9.92□□□□□ -0.82
RTN4-214ENST00000486085 COL9A3Q14050 684 aaPredicted RBP9.92□□□□□ -0.82
RTN4-214ENST00000486085 TAF1CQ15572 869 aaPredicted RBP9.92□□□□□ -0.82
RTN4-214ENST00000486085 TPTE2Q6XPS3 522 aa9.92□□□□□ -0.82
RTN4-214ENST00000486085 USP31Q70CQ4 1352 aa9.91□□□□□ -0.82
RTN4-214ENST00000486085 IKBKEQ14164 716 aa9.91□□□□□ -0.82
RTN4-214ENST00000486085 ZNF423Q2M1K9 1284 aa9.91□□□□□ -0.82
RTN4-214ENST00000486085 TRAPPC3LQ5T215 181 aa9.91□□□□□ -0.82
RTN4-214ENST00000486085 H3BRJ5 948 aa9.9□□□□□ -0.82
RTN4-214ENST00000486085 INSM1Q01101 510 aaPredicted RBP9.9□□□□□ -0.82
RTN4-214ENST00000486085 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
RTN4-214ENST00000486085 SLC7A3Q8WY07 619 aa9.9□□□□□ -0.82
RTN4-214ENST00000486085 SEC31BQ9NQW1 1179 aa9.9□□□□□ -0.82
RTN4-214ENST00000486085 GPN3Q9UHW5 284 aaPredicted RBP9.9□□□□□ -0.82
RTN4-214ENST00000486085 PPM1HQ9ULR3 514 aa9.9□□□□□ -0.82
RTN4-214ENST00000486085 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
RTN4-214ENST00000486085 ESRRAP11474 423 aaPredicted RBP9.89□□□□□ -0.83
RTN4-214ENST00000486085 RPS26P11Q5JNZ5 115 aaPredicted RBP9.89□□□□□ -0.83
RTN4-214ENST00000486085 HGSNATQ68CP4 663 aa9.89□□□□□ -0.83
RTN4-214ENST00000486085 FAM117BQ6P1L5 589 aa9.89□□□□□ -0.83
RTN4-214ENST00000486085 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
RTN4-214ENST00000486085 SCAMP3O14828 347 aaKnown RBP9.88□□□□□ -0.83
RTN4-214ENST00000486085 ST13P50502 369 aaKnown RBP9.88□□□□□ -0.83
RTN4-214ENST00000486085 TRIM11Q96F44 468 aa9.88□□□□□ -0.83
RTN4-214ENST00000486085 MKL2Q9ULH7 1088 aa9.88□□□□□ -0.83
RTN4-214ENST00000486085 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
RTN4-214ENST00000486085 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
RTN4-214ENST00000486085 CCDC85BQ15834 202 aaPredicted RBP9.87□□□□□ -0.83
RTN4-214ENST00000486085 CARD10Q9BWT7 1032 aa9.87□□□□□ -0.83
RTN4-214ENST00000486085 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
RTN4-214ENST00000486085 FSCN2O14926 492 aa9.86□□□□□ -0.83
RTN4-214ENST00000486085 B3GALT4O96024 378 aa9.86□□□□□ -0.83
RTN4-214ENST00000486085 ARL4DP49703 201 aa9.86□□□□□ -0.83
RTN4-214ENST00000486085 C9orf131Q5VYM1 1079 aa9.86□□□□□ -0.83
RTN4-214ENST00000486085 NECAB3Q96P71 396 aaPredicted RBP9.86□□□□□ -0.83
RTN4-214ENST00000486085 CEP44Q9C0F1 390 aa9.86□□□□□ -0.83
RTN4-214ENST00000486085 GNB5O14775 395 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 TCF3P15923 654 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 ZNF76P36508 570 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 PIP4K2BP78356 416 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 GSTM4Q03013 218 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 SETDB1Q15047 1291 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 ILDR2Q71H61 639 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 ANKRD24Q8TF21 1146 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
RTN4-214ENST00000486085 CELA3AP09093 270 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 FANCCQ00597 558 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 PPP2R3AQ06190 1150 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 C19orf57Q0VDD7 668 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 BEND7Q8N7W2 519 aaPredicted RBP9.84□□□□□ -0.83
RTN4-214ENST00000486085 RNF34Q969K3 372 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 KLHDC7BQ96G42 594 aa9.84□□□□□ -0.83
RTN4-214ENST00000486085 TRIM56Q9BRZ2 755 aaKnown RBP9.84□□□□□ -0.83
RTN4-214ENST00000486085 A0A0A0MRY4 1105 aa9.83□□□□□ -0.84
RTN4-214ENST00000486085 PIK3R2O00459 728 aa9.83□□□□□ -0.84
RTN4-214ENST00000486085 ENC1O14682 589 aa9.83□□□□□ -0.84
RTN4-214ENST00000486085 DEAF1O75398 565 aaPredicted RBP9.83□□□□□ -0.84
RTN4-214ENST00000486085 HDLBPQ00341 1268 aaKnown RBP9.83□□□□□ -0.84
RTN4-214ENST00000486085 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
RTN4-214ENST00000486085 WNT8BQ93098 351 aa9.83□□□□□ -0.84
RTN4-214ENST00000486085 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
RTN4-214ENST00000486085 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
RTN4-214ENST00000486085 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 PAGE1O75459 146 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 RAC1P63000 192 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 GALNT11Q8NCW6 608 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
RTN4-214ENST00000486085 IGSF5Q9NSI5 407 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
RTN4-214ENST00000486085 SPDYE3A6NKU9 549 aa9.81□□□□□ -0.84
RTN4-214ENST00000486085 F6X3S4 739 aa9.81□□□□□ -0.84
RTN4-214ENST00000486085 TRIM28Q13263 835 aaKnown RBP9.81□□□□□ -0.84
RTN4-214ENST00000486085 HS2ST1Q7LGA3 356 aa9.81□□□□□ -0.84
RTN4-214ENST00000486085 MAP4K3Q8IVH8 894 aa9.81□□□□□ -0.84
RTN4-214ENST00000486085 FMR1NBQ8N0W7 255 aaPredicted RBP9.81□□□□□ -0.84
RTN4-214ENST00000486085 DTWD1Q8N5C7 304 aa9.81□□□□□ -0.84
RTN4-214ENST00000486085 KLHL23Q8NBE8 558 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms