RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SAPCD2Q86UD0 394 aa13.28□□□□□ -0.28
DDX56-212ENST00000485367 OGFOD1Q8N543 542 aa13.28□□□□□ -0.28
DDX56-212ENST00000485367 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
DDX56-212ENST00000485367 IRS2Q9Y4H2 1338 aa13.28□□□□□ -0.28
DDX56-212ENST00000485367 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.28
DDX56-212ENST00000485367 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.28
DDX56-212ENST00000485367 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.28
DDX56-212ENST00000485367 AIDAQ96BJ3 306 aa13.27□□□□□ -0.28
DDX56-212ENST00000485367 BRPF3Q9ULD4 1205 aa13.27□□□□□ -0.28
DDX56-212ENST00000485367 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
DDX56-212ENST00000485367 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
DDX56-212ENST00000485367 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
DDX56-212ENST00000485367 KIAA0825Q8IV33 1275 aa13.26□□□□□ -0.29
DDX56-212ENST00000485367 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
DDX56-212ENST00000485367 FOXN1O15353 648 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 HUNKP57058 714 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 CDCA5Q96FF9 252 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 WBP1LQ9NX94 342 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 SCAF8Q9UPN6 1271 aaKnown RBP13.25□□□□□ -0.29
DDX56-212ENST00000485367 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 AOC2O75106 756 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 SASH1O94885 1247 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 IL1R1P14778 569 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
DDX56-212ENST00000485367 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 C2orf69Q8N8R5 385 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
DDX56-212ENST00000485367 HDAC9Q9UKV0 1011 aa13.25□□□□□ -0.29
DDX56-212ENST00000485367 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
DDX56-212ENST00000485367 GYG1P46976 350 aa13.24□□□□□ -0.29
DDX56-212ENST00000485367 MMP14P50281 582 aa13.24□□□□□ -0.29
DDX56-212ENST00000485367 MAP2K1Q02750 393 aaPredicted RBP13.24□□□□□ -0.29
DDX56-212ENST00000485367 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
DDX56-212ENST00000485367 HHIPL1Q96JK4 782 aa13.24□□□□□ -0.29
DDX56-212ENST00000485367 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
DDX56-212ENST00000485367 WNT10BO00744 389 aa13.23□□□□□ -0.29
DDX56-212ENST00000485367 HIBADHP31937 336 aaKnown RBP13.23□□□□□ -0.29
DDX56-212ENST00000485367 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
DDX56-212ENST00000485367 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
DDX56-212ENST00000485367 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
DDX56-212ENST00000485367 FAM84BQ96KN1 310 aaPredicted RBP13.22□□□□□ -0.29
DDX56-212ENST00000485367 MAP2K2P36507 400 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 TNS4Q8IZW8 715 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 ARHGAP45Q92619 1136 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
DDX56-212ENST00000485367 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
DDX56-212ENST00000485367 BCAR3O75815 825 aa13.21□□□□□ -0.29
DDX56-212ENST00000485367 PDE8BO95263 885 aa13.21□□□□□ -0.29
DDX56-212ENST00000485367 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
DDX56-212ENST00000485367 PRAMEF18Q5VWM3 479 aa13.21□□□□□ -0.29
DDX56-212ENST00000485367 RGMBQ6NW40 437 aa13.21□□□□□ -0.29
DDX56-212ENST00000485367 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
DDX56-212ENST00000485367 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
DDX56-212ENST00000485367 EYA2O00167 538 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 LBX1P52954 281 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
DDX56-212ENST00000485367 VGLL2Q8N8G2 317 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 MEIS3Q99687 375 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
DDX56-212ENST00000485367 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
DDX56-212ENST00000485367 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 CAVIN4Q5BKX8 364 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
DDX56-212ENST00000485367 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 ZBED3Q96IU2 234 aaPredicted RBP13.2□□□□□ -0.3
DDX56-212ENST00000485367 SIL1Q9H173 461 aa13.2□□□□□ -0.3
DDX56-212ENST00000485367 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDX56-212ENST00000485367 PTPN12Q05209 780 aaKnown RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 NOGQ13253 232 aa13.19□□□□□ -0.3
DDX56-212ENST00000485367 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 APOBEC3FQ8IUX4 373 aaKnown RBP13.19□□□□□ -0.3
DDX56-212ENST00000485367 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
DDX56-212ENST00000485367 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
DDX56-212ENST00000485367 PCDHAC2Q9Y5I4 1007 aa13.19□□□□□ -0.3
DDX56-212ENST00000485367 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
DDX56-212ENST00000485367 TRIM27P14373 513 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 BCAMP50895 628 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 FKBP1BP68106 108 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
DDX56-212ENST00000485367 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
DDX56-212ENST00000485367 MOB2Q70IA6 237 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 MTMR14Q8NCE2 650 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
DDX56-212ENST00000485367 FAM155AB1AL88 458 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms