RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 KCNA3P22001 575 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 HSPA4P34932 840 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 DENND2AQ9ULE3 1009 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 PDS5AQ29RF7 1337 aaKnown RBP12.16□□□□□ -0.46
HDAC6-226ENST00000483656 IDH1O75874 414 aaKnown RBP12.16□□□□□ -0.46
HDAC6-226ENST00000483656 PDE6AP16499 860 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 UBE3CQ15386 1083 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
HDAC6-226ENST00000483656 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
HDAC6-226ENST00000483656 APPBP2Q92624 585 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 KCNB2Q92953 911 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 CNKSR1Q969H4 720 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
HDAC6-226ENST00000483656 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
HDAC6-226ENST00000483656 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-226ENST00000483656 DPEP1P16444 411 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 LRRFIP1Q32MZ4 808 aaKnown RBP12.15□□□□□ -0.46
HDAC6-226ENST00000483656 SLC9C2Q5TAH2 1124 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 MPNDQ8N594 471 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.15□□□□□ -0.462e-8■■■■□ 26
HDAC6-226ENST00000483656 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
HDAC6-226ENST00000483656 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 MYH7P12883 1935 aa12.15□□□□□ -0.46
HDAC6-226ENST00000483656 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 FOXP2O15409 715 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 IL1R1P14778 569 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 ANAPC15P60006 121 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
HDAC6-226ENST00000483656 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
HDAC6-226ENST00000483656 MCCP23508 829 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 POLD1P28340 1107 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 PTGER2P43116 358 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 MAP3K12Q12852 859 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-226ENST00000483656 RABEP1Q15276 862 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-226ENST00000483656 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-226ENST00000483656 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
HDAC6-226ENST00000483656 SLC27A2O14975 620 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 RIMBP2O15034 1052 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 GPAA1O43292 621 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
HDAC6-226ENST00000483656 GRIK5Q16478 980 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 SNX21Q969T3 373 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-226ENST00000483656 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
HDAC6-226ENST00000483656 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HDAC6-226ENST00000483656 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-226ENST00000483656 TGFB2P61812 414 aa12.11□□□□□ -0.47
HDAC6-226ENST00000483656 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
HDAC6-226ENST00000483656 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
HDAC6-226ENST00000483656 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
HDAC6-226ENST00000483656 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-226ENST00000483656 FAM205AQ6ZU69 1335 aa12.11□□□□□ -0.47
HDAC6-226ENST00000483656 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 C21orf2O43822 256 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 CYP7A1P22680 504 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 PRDX5P30044 214 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-226ENST00000483656 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 CC2D2BQ6DHV5 1058 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
HDAC6-226ENST00000483656 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
HDAC6-226ENST00000483656 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
HDAC6-226ENST00000483656 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-226ENST00000483656 CHD4Q14839 1912 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 MBD4O95243 580 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 CYP21A2P08686 494 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms