RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SAPCD2Q86UD0 394 aa17.3■□□□□ 0.36
VARS-225ENST00000482996 CERS5Q8N5B7 392 aa17.3■□□□□ 0.36
VARS-225ENST00000482996 SIL1Q9H173 461 aa17.3■□□□□ 0.36
VARS-225ENST00000482996 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
VARS-225ENST00000482996 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
VARS-225ENST00000482996 WNT10BO00744 389 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
VARS-225ENST00000482996 CIAO1O76071 339 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 HSPA1AP0DMV8 641 aaKnown RBP17.29■□□□□ 0.36
VARS-225ENST00000482996 HSPA1BP0DMV9 641 aaKnown RBP17.29■□□□□ 0.36
VARS-225ENST00000482996 SLC5A1P13866 664 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
VARS-225ENST00000482996 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
VARS-225ENST00000482996 ZNF646O15015 1829 aaPredicted RBP17.28■□□□□ 0.36
VARS-225ENST00000482996 GNAI2P04899 355 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
VARS-225ENST00000482996 DLGAP5Q15398 846 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 C2orf69Q8N8R5 385 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 LPIN2Q92539 896 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 CDCA5Q96FF9 252 aa17.28■□□□□ 0.36
VARS-225ENST00000482996 GBA2Q9HCG7 927 aaPredicted RBP17.28■□□□□ 0.36
VARS-225ENST00000482996 F8W031 263 aaPredicted RBP17.27■□□□□ 0.36
VARS-225ENST00000482996 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 FGFR2P21802 821 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 HUNKP57058 714 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 GRM1Q13255 1194 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
VARS-225ENST00000482996 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 MTX1Q13505 466 aa17.26■□□□□ 0.35
VARS-225ENST00000482996 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
VARS-225ENST00000482996 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
VARS-225ENST00000482996 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 IQSEC3Q9UPP2 1182 aaPredicted RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
VARS-225ENST00000482996 MYO1BO43795 1136 aa17.25■□□□□ 0.35
VARS-225ENST00000482996 BCAMP50895 628 aa17.25■□□□□ 0.35
VARS-225ENST00000482996 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
VARS-225ENST00000482996 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
VARS-225ENST00000482996 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
VARS-225ENST00000482996 MAP2K1Q02750 393 aaPredicted RBP17.24■□□□□ 0.35
VARS-225ENST00000482996 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
VARS-225ENST00000482996 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
VARS-225ENST00000482996 NF2P35240 595 aa17.23■□□□□ 0.35
VARS-225ENST00000482996 FKBP1BP68106 108 aa17.23■□□□□ 0.35
VARS-225ENST00000482996 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
VARS-225ENST00000482996 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
VARS-225ENST00000482996 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
VARS-225ENST00000482996 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 MS4A1P11836 297 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 MAP2K2P36507 400 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
VARS-225ENST00000482996 RGMBQ6NW40 437 aa17.21■□□□□ 0.35
VARS-225ENST00000482996 BEGAINQ9BUH8 593 aa17.21■□□□□ 0.35
VARS-225ENST00000482996 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
VARS-225ENST00000482996 AOC2O75106 756 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 RLBP1P12271 317 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 CTCFP49711 727 aaPredicted RBP17.2■□□□□ 0.34
VARS-225ENST00000482996 NOGQ13253 232 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■■■ 32.2
VARS-225ENST00000482996 TTLL12Q14166 644 aaPredicted RBP17.2■□□□□ 0.34
VARS-225ENST00000482996 PRAMEF18Q5VWM3 479 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
VARS-225ENST00000482996 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
VARS-225ENST00000482996 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
VARS-225ENST00000482996 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 FOXN1O15353 648 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 CRKP46108 304 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
VARS-225ENST00000482996 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
VARS-225ENST00000482996 DEFB129Q9H1M3 183 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 PPP2R3BQ9Y5P8 575 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 MAST3O60307 1309 aa17.19■□□□□ 0.34
VARS-225ENST00000482996 PAPPA2Q9BXP8 1791 aa17.18■□□□□ 0.34
VARS-225ENST00000482996 TFCP2Q12800 502 aa17.18■□□□□ 0.34
VARS-225ENST00000482996 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
VARS-225ENST00000482996 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
VARS-225ENST00000482996 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
VARS-225ENST00000482996 SEMA3EO15041 775 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
VARS-225ENST00000482996 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 GRIK5Q16478 980 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms