RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 LPIN2Q92539 896 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 CEP126Q9P2H0 1117 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 PGAP2Q9UHJ9 254 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 PCDHAC2Q9Y5I4 1007 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 ARAP2Q8WZ64 1704 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 FAM205AQ6ZU69 1335 aa15.18■□□□□ 0.02
PTPRF-213ENST00000481019 TRAF5O00463 557 aa15.18■□□□□ 0.02
PTPRF-213ENST00000481019 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
PTPRF-213ENST00000481019 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
PTPRF-213ENST00000481019 TIMM10P62072 90 aa15.18■□□□□ 0.02
PTPRF-213ENST00000481019 KIAA0825Q8IV33 1275 aa15.18■□□□□ 0.02
PTPRF-213ENST00000481019 IFIT1P09914 478 aaKnown RBP15.17■□□□□ 0.02
PTPRF-213ENST00000481019 SLC5A1P13866 664 aa15.17■□□□□ 0.02
PTPRF-213ENST00000481019 KIF4BQ2VIQ3 1234 aa15.17■□□□□ 0.02
PTPRF-213ENST00000481019 GLIS2Q9BZE0 524 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-213ENST00000481019 MYOZ2Q9NPC6 264 aa15.17■□□□□ 0.02
PTPRF-213ENST00000481019 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
PTPRF-213ENST00000481019 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
PTPRF-213ENST00000481019 AOX1Q06278 1338 aa15.17■□□□□ 0.02
PTPRF-213ENST00000481019 POLR2AP24928 1970 aaKnown RBP15.16■□□□□ 0.02
PTPRF-213ENST00000481019 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
PTPRF-213ENST00000481019 PHKA1P46020 1223 aa15.16■□□□□ 0.02
PTPRF-213ENST00000481019 CHAF1AQ13111 956 aaPredicted RBP15.16■□□□□ 0.02
PTPRF-213ENST00000481019 SURF6O75683 361 aaKnown RBP15.15■□□□□ 0.02
PTPRF-213ENST00000481019 APLP1P51693 650 aa15.15■□□□□ 0.02
PTPRF-213ENST00000481019 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPRF-213ENST00000481019 SCARF1Q14162 830 aa15.15■□□□□ 0.02
PTPRF-213ENST00000481019 NBPF9Q3BBW0 867 aa15.15■□□□□ 0.02
PTPRF-213ENST00000481019 CAVIN4Q5BKX8 364 aa15.15■□□□□ 0.02
PTPRF-213ENST00000481019 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
PTPRF-213ENST00000481019 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 ADM5C9JUS6 153 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 MFSD14BQ5SR56 506 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
PTPRF-213ENST00000481019 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 MYO3BQ8WXR4 1341 aa15.14■□□□□ 0.01
PTPRF-213ENST00000481019 FKBP1AP62942 108 aaKnown RBP15.13■□□□□ 0.01
PTPRF-213ENST00000481019 CST9Q5W186 159 aa15.13■□□□□ 0.01
PTPRF-213ENST00000481019 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
PTPRF-213ENST00000481019 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
PTPRF-213ENST00000481019 ZC3H15Q8WU90 426 aaKnown RBP15.13■□□□□ 0.01
PTPRF-213ENST00000481019 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
PTPRF-213ENST00000481019 PCNTO95613 3336 aa15.12■□□□□ 0.01
PTPRF-213ENST00000481019 WNT10BO00744 389 aa15.12■□□□□ 0.01
PTPRF-213ENST00000481019 ANGEL2Q5VTE6 544 aaKnown RBP15.12■□□□□ 0.01
PTPRF-213ENST00000481019 NEUROD6Q96NK8 337 aa15.12■□□□□ 0.01
PTPRF-213ENST00000481019 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
PTPRF-213ENST00000481019 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
PTPRF-213ENST00000481019 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-213ENST00000481019 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-213ENST00000481019 TNNI3KQ59H18 835 aa15.11■□□□□ 0.01
PTPRF-213ENST00000481019 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
PTPRF-213ENST00000481019 FPGT-TNNI3KV9GXZ4 949 aa15.11■□□□□ 0.01
PTPRF-213ENST00000481019 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 RASGRF1Q13972 1273 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 CFAP100Q494V2 611 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 PI16Q6UXB8 463 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 KRT26Q7Z3Y9 468 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 RPAP2Q8IXW5 612 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-213ENST00000481019 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 PRMT6Q96LA8 375 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-213ENST00000481019 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 TTF2Q9UNY4 1162 aaKnown RBP15.1■□□□□ 0.01
PTPRF-213ENST00000481019 AKAP2Q9Y2D5 859 aa15.1■□□□□ 0.01
PTPRF-213ENST00000481019 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
PTPRF-213ENST00000481019 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
PTPRF-213ENST00000481019 EAF2Q96CJ1 260 aaPredicted RBP15.09■□□□□ 0.01
PTPRF-213ENST00000481019 CCDC8Q9H0W5 538 aaPredicted RBP15.09■□□□□ 0.01
PTPRF-213ENST00000481019 HDAC9Q9UKV0 1011 aa15.09■□□□□ 0.01
PTPRF-213ENST00000481019 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
PTPRF-213ENST00000481019 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 TMEM88BA6NKF7 163 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 APBB1O00213 710 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 SPDYE6P0CI01 402 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 PRDX5P30044 214 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 MTMR14Q8NCE2 650 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 DCPSQ96C86 337 aaKnown RBP15.08■□□□□ 0
PTPRF-213ENST00000481019 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 GPR108Q9NPR9 543 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 CREBZFQ9NS37 354 aa15.08■□□□□ 0
PTPRF-213ENST00000481019 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
PTPRF-213ENST00000481019 CLRN2A0PK11 232 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 CELF2O95319 508 aaKnown RBP15.07■□□□□ 0
PTPRF-213ENST00000481019 CRKP46108 304 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 DLGAP5Q15398 846 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 HMG20BQ9P0W2 317 aa15.07■□□□□ 0
PTPRF-213ENST00000481019 MKRN1Q9UHC7 482 aaKnown RBP15.07■□□□□ 0
PTPRF-213ENST00000481019 ECM29Q5VYK3 1845 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
PTPRF-213ENST00000481019 MCAMP43121 646 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 WDR66Q8TBY9 1149 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms