RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 GCC1Q96CN9 775 aa24.26■■□□□ 1.47
LIME1-205ENST00000480139 RWDD1Q9H446 243 aaPredicted RBP24.26■■□□□ 1.47
LIME1-205ENST00000480139 ZBTB12Q9Y330 459 aaPredicted RBP24.26■■□□□ 1.47
LIME1-205ENST00000480139 PDS5AQ29RF7 1337 aaKnown RBP24.26■■□□□ 1.47
LIME1-205ENST00000480139 APBB1O00213 710 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 FRAT2O75474 233 aaPredicted RBP24.25■■□□□ 1.47
LIME1-205ENST00000480139 MMP14P50281 582 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 GORABQ5T7V8 394 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 FBXW7Q969H0 707 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 DBNDD2Q9BQY9 259 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 IL1RAPL2Q9NP60 686 aa24.25■■□□□ 1.47
LIME1-205ENST00000480139 DBNLQ9UJU6 430 aaKnown RBP24.25■■□□□ 1.47
LIME1-205ENST00000480139 COL1A1P02452 1464 aaPredicted RBP24.25■■□□□ 1.47
LIME1-205ENST00000480139 ARID4AP29374 1257 aaPredicted RBP24.24■■□□□ 1.47
LIME1-205ENST00000480139 AACSQ86V21 672 aa24.24■■□□□ 1.47
LIME1-205ENST00000480139 TBC1D22AQ8WUA7 517 aa24.24■■□□□ 1.47
LIME1-205ENST00000480139 ZNF512BQ96KM6 892 aaPredicted RBP24.24■■□□□ 1.47
LIME1-205ENST00000480139 TAF1DQ9H5J8 278 aaPredicted RBP24.24■■□□□ 1.47
LIME1-205ENST00000480139 DENND2AQ9ULE3 1009 aa24.24■■□□□ 1.47
LIME1-205ENST00000480139 IQSEC3Q9UPP2 1182 aaPredicted RBP24.24■■□□□ 1.47
LIME1-205ENST00000480139 KIF3CO14782 793 aa24.23■■□□□ 1.47
LIME1-205ENST00000480139 UQCRFS1P1P0C7P4 283 aa24.23■■□□□ 1.47
LIME1-205ENST00000480139 CCDC158Q5M9N0 1113 aa24.23■■□□□ 1.47
LIME1-205ENST00000480139 CNOT7Q9UIV1 285 aaKnown RBP24.23■■□□□ 1.47
LIME1-205ENST00000480139 ADAMTSL1Q8N6G6 1762 aa24.22■■□□□ 1.47
LIME1-205ENST00000480139 EPHX2P34913 555 aa24.22■■□□□ 1.47
LIME1-205ENST00000480139 EPS15P42566 896 aa24.22■■□□□ 1.47
LIME1-205ENST00000480139 MICALL2Q8IY33 904 aa24.22■■□□□ 1.47
LIME1-205ENST00000480139 CERS5Q8N5B7 392 aa24.22■■□□□ 1.47
LIME1-205ENST00000480139 CCDC8Q9H0W5 538 aaPredicted RBP24.22■■□□□ 1.47
LIME1-205ENST00000480139 TLR7Q9NYK1 1049 aaKnown RBP24.22■■□□□ 1.47
LIME1-205ENST00000480139 SALL1Q9NSC2 1324 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 USP17L8P0C7I0 530 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 ZNF280AP59817 542 aaPredicted RBP24.21■■□□□ 1.47
LIME1-205ENST00000480139 RASGRF1Q13972 1273 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 PNMA8AQ86V59 439 aaPredicted RBP24.21■■□□□ 1.47
LIME1-205ENST00000480139 SMC5Q8IY18 1101 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 WDR66Q8TBY9 1149 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 MXD3Q9BW11 206 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 ADARB2Q9NS39 739 aaKnown RBP24.21■■□□□ 1.47
LIME1-205ENST00000480139 AKAP11Q9UKA4 1901 aa24.21■■□□□ 1.47
LIME1-205ENST00000480139 H7C1D1 291 aa24.2■■□□□ 1.46
LIME1-205ENST00000480139 IFIT2P09913 472 aaKnown RBP24.2■■□□□ 1.46
LIME1-205ENST00000480139 CHAF1AQ13111 956 aaPredicted RBP24.2■■□□□ 1.46
LIME1-205ENST00000480139 USP50Q70EL3 339 aaPredicted RBP24.2■■□□□ 1.46
LIME1-205ENST00000480139 JAG2Q9Y219 1238 aa24.2■■□□□ 1.46
LIME1-205ENST00000480139 SUGT1Q9Y2Z0 365 aa24.2■■□□□ 1.46
LIME1-205ENST00000480139 IGHDP01880 384 aa24.19■■□□□ 1.46
LIME1-205ENST00000480139 TTC39AQ5SRH9 613 aa24.19■■□□□ 1.46
LIME1-205ENST00000480139 OGFOD1Q8N543 542 aa24.19■■□□□ 1.46
LIME1-205ENST00000480139 SMARCA5O60264 1052 aaPredicted RBP24.18■■□□□ 1.46
LIME1-205ENST00000480139 NEFLP07196 543 aa24.18■■□□□ 1.46
LIME1-205ENST00000480139 MCAMP43121 646 aa24.17■■□□□ 1.46
LIME1-205ENST00000480139 KIAA0825Q8IV33 1275 aa24.17■■□□□ 1.46
LIME1-205ENST00000480139 C16orf71Q8IYS4 520 aaPredicted RBP24.17■■□□□ 1.46
LIME1-205ENST00000480139 ZGPATQ8N5A5 531 aaKnown RBP24.17■■□□□ 1.46
LIME1-205ENST00000480139 SPATA5Q8NB90 893 aa24.17■■□□□ 1.46
LIME1-205ENST00000480139 HMG20BQ9P0W2 317 aa24.17■■□□□ 1.46
LIME1-205ENST00000480139 HDAC9Q9UKV0 1011 aa24.17■■□□□ 1.46
LIME1-205ENST00000480139 SHTN1A0MZ66 631 aa24.16■■□□□ 1.46
LIME1-205ENST00000480139 SCARF1Q14162 830 aa24.15■■□□□ 1.46
LIME1-205ENST00000480139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.15■■□□□ 1.46
LIME1-205ENST00000480139 MYOZ2Q9NPC6 264 aa24.15■■□□□ 1.46
LIME1-205ENST00000480139 MAST3O60307 1309 aa24.14■■□□□ 1.46
LIME1-205ENST00000480139 TOMM70O94826 608 aa24.14■■□□□ 1.45
LIME1-205ENST00000480139 LDHDQ86WU2 507 aa24.14■■□□□ 1.45
LIME1-205ENST00000480139 ZBTB47Q9UFB7 747 aaPredicted RBP24.14■■□□□ 1.45
LIME1-205ENST00000480139 HDLBPQ00341 1268 aaKnown RBP24.13■■□□□ 1.45
LIME1-205ENST00000480139 KIF4BQ2VIQ3 1234 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 ANKRD45Q5TZF3 282 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 SAMD7Q7Z3H4 446 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 MTMR14Q8NCE2 650 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 RBM46Q8TBY0 533 aaKnown RBP24.13■■□□□ 1.45
LIME1-205ENST00000480139 TRPM4Q8TD43 1214 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 ZC3H15Q8WU90 426 aaKnown RBP24.13■■□□□ 1.45
LIME1-205ENST00000480139 MRIQ9BWK5 157 aa24.13■■□□□ 1.45
LIME1-205ENST00000480139 TTF2Q9UNY4 1162 aaKnown RBP24.13■■□□□ 1.45
LIME1-205ENST00000480139 ECM29Q5VYK3 1845 aa24.12■■□□□ 1.45
LIME1-205ENST00000480139 IGSF3O75054 1194 aa24.12■■□□□ 1.45
LIME1-205ENST00000480139 TBC1D10BQ4KMP7 808 aaPredicted RBP24.12■■□□□ 1.45
LIME1-205ENST00000480139 EAPPQ56P03 285 aaPredicted RBP24.12■■□□□ 1.45
LIME1-205ENST00000480139 PI16Q6UXB8 463 aa24.12■■□□□ 1.45
LIME1-205ENST00000480139 SERPINA10Q9UK55 444 aa24.12■■□□□ 1.45
LIME1-205ENST00000480139 MAST2Q6P0Q8 1798 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 EGFRP00533 1210 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 ATP5JP18859 108 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 HIRAP54198 1017 aaPredicted RBP24.11■■□□□ 1.45
LIME1-205ENST00000480139 GRIK5Q16478 980 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 SPTY2D1Q68D10 685 aaPredicted RBP24.11■■□□□ 1.45
LIME1-205ENST00000480139 GPATCH3Q96I76 525 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 PGAP2Q9UHJ9 254 aa24.11■■□□□ 1.45
LIME1-205ENST00000480139 DOCK2Q92608 1830 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 F8W031 263 aaPredicted RBP24.1■■□□□ 1.45
LIME1-205ENST00000480139 LDHBP07195 334 aaKnown RBP24.1■■□□□ 1.45
LIME1-205ENST00000480139 POTEIP0CG38 1075 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 POTEJP0CG39 1038 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 PRDX5P30044 214 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 NUCB1Q02818 461 aa24.1■■□□□ 1.45
LIME1-205ENST00000480139 ZBED3Q96IU2 234 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms