RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 USP17L3A6NCW0 530 aa33.05■■■□□ 2.88
CCM2-211ENST00000478582 USP17L4A6NCW7 530 aa33.05■■■□□ 2.88
CCM2-211ENST00000478582 USP17L1Q7RTZ2 530 aa33.05■■■□□ 2.88
CCM2-211ENST00000478582 AGBL3Q8NEM8 1001 aa33.05■■■□□ 2.88
CCM2-211ENST00000478582 TDRD7Q8NHU6 1098 aaKnown RBP33.05■■■□□ 2.88
CCM2-211ENST00000478582 TIMM10P62072 90 aa33.04■■■□□ 2.88
CCM2-211ENST00000478582 RSBN1LQ6PCB5 846 aaPredicted RBP33.04■■■□□ 2.88
CCM2-211ENST00000478582 A0A1B0GUL7 405 aa33.03■■■□□ 2.88
CCM2-211ENST00000478582 RAB11FIP3O75154 756 aa33.03■■■□□ 2.88
CCM2-211ENST00000478582 STRIP1Q5VSL9 837 aa33.03■■■□□ 2.88
CCM2-211ENST00000478582 SAMD7Q7Z3H4 446 aa33.03■■■□□ 2.88
CCM2-211ENST00000478582 ZNF609O15014 1411 aa33.02■■■□□ 2.88
CCM2-211ENST00000478582 CENPBP07199 599 aaPredicted RBP33.02■■■□□ 2.88
CCM2-211ENST00000478582 BCAMP50895 628 aa33.02■■■□□ 2.88
CCM2-211ENST00000478582 VPS37DQ86XT2 251 aa33.02■■■□□ 2.88
CCM2-211ENST00000478582 ZBTB22O15209 634 aa33.01■■■□□ 2.87
CCM2-211ENST00000478582 RHPN1Q8TCX5 695 aa33.01■■■□□ 2.87
CCM2-211ENST00000478582 DCTPP1Q9H773 170 aa33.01■■■□□ 2.87
CCM2-211ENST00000478582 TBC1D10BQ4KMP7 808 aaPredicted RBP33■■■□□ 2.87
CCM2-211ENST00000478582 TNNI3KQ59H18 835 aa33■■■□□ 2.87
CCM2-211ENST00000478582 DACT2Q5SW24 774 aa33■■■□□ 2.87
CCM2-211ENST00000478582 TTLL5Q6EMB2 1281 aa33■■■□□ 2.87
CCM2-211ENST00000478582 KIF1BPQ96EK5 621 aa33■■■□□ 2.87
CCM2-211ENST00000478582 GMLQ99445 158 aa33■■■□□ 2.87
CCM2-211ENST00000478582 FPGT-TNNI3KV9GXZ4 949 aa33■■■□□ 2.87
CCM2-211ENST00000478582 FMR1Q06787 632 aaKnown RBP eCLIP32.99■■■□□ 2.878e-10■■■■■ 77.9
CCM2-211ENST00000478582 XAGE2Q96GT9 111 aa32.99■■■□□ 2.87
CCM2-211ENST00000478582 MKRN1Q9UHC7 482 aaKnown RBP32.99■■■□□ 2.87
CCM2-211ENST00000478582 ARAP2Q8WZ64 1704 aa32.99■■■□□ 2.87
CCM2-211ENST00000478582 TRAF5O00463 557 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 EGFRP00533 1210 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 ADORA1P30542 326 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 GTF2IP78347 998 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 IRX6P78412 446 aaPredicted RBP32.98■■■□□ 2.87
CCM2-211ENST00000478582 RBM26Q5T8P6 1007 aaKnown RBP32.98■■■□□ 2.87
CCM2-211ENST00000478582 NEUROD6Q96NK8 337 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 FAM205AQ6ZU69 1335 aa32.98■■■□□ 2.87
CCM2-211ENST00000478582 ZNF280AP59817 542 aaPredicted RBP32.97■■■□□ 2.87
CCM2-211ENST00000478582 CDC37L1Q7L3B6 337 aa32.97■■■□□ 2.87
CCM2-211ENST00000478582 GLIS2Q9BZE0 524 aaPredicted RBP32.97■■■□□ 2.87
CCM2-211ENST00000478582 HDAC1Q13547 482 aaPredicted RBP32.96■■■□□ 2.87
CCM2-211ENST00000478582 MYO3BQ8WXR4 1341 aa32.96■■■□□ 2.87
CCM2-211ENST00000478582 CNTNAP1P78357 1384 aa32.96■■■□□ 2.87
CCM2-211ENST00000478582 ZNF646O15015 1829 aaPredicted RBP32.95■■■□□ 2.87
CCM2-211ENST00000478582 TRPM7Q96QT4 1865 aa32.95■■■□□ 2.87
CCM2-211ENST00000478582 FKBP1AP62942 108 aaKnown RBP32.95■■■□□ 2.87
CCM2-211ENST00000478582 KIF4BQ2VIQ3 1234 aa32.95■■■□□ 2.87
CCM2-211ENST00000478582 CCDC102BQ68D86 513 aa32.95■■■□□ 2.87
CCM2-211ENST00000478582 GNL3LQ9NVN8 582 aaKnown RBP32.95■■■□□ 2.87
CCM2-211ENST00000478582 USP17L8P0C7I0 530 aa32.94■■■□□ 2.86
CCM2-211ENST00000478582 PHKA1P46020 1223 aa32.94■■■□□ 2.86
CCM2-211ENST00000478582 EAF2Q96CJ1 260 aaPredicted RBP32.94■■■□□ 2.86
CCM2-211ENST00000478582 CST9Q5W186 159 aa32.93■■■□□ 2.86
CCM2-211ENST00000478582 FBXW7Q969H0 707 aa32.93■■■□□ 2.86
CCM2-211ENST00000478582 SEMA3EO15041 775 aa32.92■■■□□ 2.86
CCM2-211ENST00000478582 IQSEC3Q9UPP2 1182 aaPredicted RBP32.92■■■□□ 2.86
CCM2-211ENST00000478582 RASSF10A6NK89 507 aa32.91■■■□□ 2.86
CCM2-211ENST00000478582 FRAT2O75474 233 aaPredicted RBP32.91■■■□□ 2.86
CCM2-211ENST00000478582 CLASRPQ8N2M8 674 aaKnown RBP32.91■■■□□ 2.86
CCM2-211ENST00000478582 DCPSQ96C86 337 aaKnown RBP32.91■■■□□ 2.86
CCM2-211ENST00000478582 MXD3Q9BW11 206 aa32.91■■■□□ 2.86
CCM2-211ENST00000478582 IL1RAPL2Q9NP60 686 aa32.91■■■□□ 2.86
CCM2-211ENST00000478582 ABT1Q9ULW3 272 aaKnown RBP32.91■■■□□ 2.86
CCM2-211ENST00000478582 APBB1O00213 710 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 DEFB115Q30KQ5 88 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 GORABQ5T7V8 394 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 USP48Q86UV5 1035 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 DBNDD2Q9BQY9 259 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 LRRCC1Q9C099 1032 aa32.9■■■□□ 2.86
CCM2-211ENST00000478582 POLR2AP24928 1970 aaKnown RBP32.9■■■□□ 2.86
CCM2-211ENST00000478582 MMP14P50281 582 aa32.89■■■□□ 2.86
CCM2-211ENST00000478582 CERS5Q8N5B7 392 aa32.89■■■□□ 2.86
CCM2-211ENST00000478582 MYOZ2Q9NPC6 264 aa32.89■■■□□ 2.86
CCM2-211ENST00000478582 DBNLQ9UJU6 430 aaKnown RBP32.89■■■□□ 2.86
CCM2-211ENST00000478582 DENND2AQ9ULE3 1009 aa32.89■■■□□ 2.86
CCM2-211ENST00000478582 AACSQ86V21 672 aa32.88■■■□□ 2.85
CCM2-211ENST00000478582 TBC1D22AQ8WUA7 517 aa32.88■■■□□ 2.85
CCM2-211ENST00000478582 CCDC8Q9H0W5 538 aaPredicted RBP32.88■■■□□ 2.85
CCM2-211ENST00000478582 RWDD1Q9H446 243 aaPredicted RBP32.88■■■□□ 2.85
CCM2-211ENST00000478582 PDS5AQ29RF7 1337 aaKnown RBP32.87■■■□□ 2.85
CCM2-211ENST00000478582 CELF2O95319 508 aaKnown RBP32.87■■■□□ 2.85
CCM2-211ENST00000478582 ARID4AP29374 1257 aaPredicted RBP32.87■■■□□ 2.85
CCM2-211ENST00000478582 VEGFBP49765 207 aa32.87■■■□□ 2.85
CCM2-211ENST00000478582 KRT26Q7Z3Y9 468 aa32.87■■■□□ 2.85
CCM2-211ENST00000478582 OGFOD1Q8N543 542 aa32.87■■■□□ 2.85
CCM2-211ENST00000478582 JAG2Q9Y219 1238 aa32.87■■■□□ 2.85
CCM2-211ENST00000478582 UQCRFS1P1P0C7P4 283 aa32.86■■■□□ 2.85
CCM2-211ENST00000478582 SCARF1Q14162 830 aa32.86■■■□□ 2.85
CCM2-211ENST00000478582 CCDC158Q5M9N0 1113 aa32.86■■■□□ 2.85
CCM2-211ENST00000478582 MFSD14BQ5SR56 506 aa32.86■■■□□ 2.85
CCM2-211ENST00000478582 GCC1Q96CN9 775 aa32.86■■■□□ 2.85
CCM2-211ENST00000478582 ZNF512BQ96KM6 892 aaPredicted RBP32.86■■■□□ 2.85
CCM2-211ENST00000478582 CHAF1AQ13111 956 aaPredicted RBP32.85■■■□□ 2.85
CCM2-211ENST00000478582 WDR66Q8TBY9 1149 aa32.85■■■□□ 2.85
CCM2-211ENST00000478582 TLR7Q9NYK1 1049 aaKnown RBP32.85■■■□□ 2.85
CCM2-211ENST00000478582 GGA3Q9NZ52 723 aa32.85■■■□□ 2.85
CCM2-211ENST00000478582 TLL2Q9Y6L7 1015 aa32.85■■■□□ 2.85
CCM2-211ENST00000478582 RASGRF1Q13972 1273 aa32.84■■■□□ 2.85
CCM2-211ENST00000478582 COL1A1P02452 1464 aaPredicted RBP32.84■■■□□ 2.85
CCM2-211ENST00000478582 ASTN2O75129 1339 aaPredicted RBP32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms