RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 ZNF423Q2M1K9 1284 aa9.24□□□□□ -0.93
CNOT9-206ENST00000473626 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
CNOT9-206ENST00000473626 DTHD1Q6ZMT9 781 aa9.24□□□□□ -0.93
CNOT9-206ENST00000473626 ZNF576Q9H609 170 aa9.24□□□□□ -0.93
CNOT9-206ENST00000473626 AK5Q9Y6K8 562 aa9.24□□□□□ -0.93
CNOT9-206ENST00000473626 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
CNOT9-206ENST00000473626 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 H3BRJ5 948 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 EIF4BP23588 611 aaKnown RBP9.23□□□□□ -0.93
CNOT9-206ENST00000473626 ITPKAP23677 461 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 FAAP100Q0VG06 881 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 GRIK4Q16099 956 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
CNOT9-206ENST00000473626 FAM177BA6PVY3 158 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 DDX3YO15523 660 aaKnown RBP9.22□□□□□ -0.93
CNOT9-206ENST00000473626 FBXO24O75426 580 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 ESRRAP11474 423 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-206ENST00000473626 PCDH1Q08174 1060 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 TRIM28Q13263 835 aaKnown RBP9.22□□□□□ -0.93
CNOT9-206ENST00000473626 IKBKEQ14164 716 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-206ENST00000473626 C3orf58Q8NDZ4 430 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 KLHDC7BQ96G42 594 aa9.22□□□□□ -0.93
CNOT9-206ENST00000473626 TM4SF5O14894 197 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 FSCN2O14926 492 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 CTSHP09668 335 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 CABP4P57796 275 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 CLEC4MQ9H2X3 399 aaPredicted RBP9.21□□□□□ -0.94
CNOT9-206ENST00000473626 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 KCNK4Q9NYG8 393 aa9.21□□□□□ -0.94
CNOT9-206ENST00000473626 FGD1P98174 961 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 MEI1Q5TIA1 1274 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 CACTIN-AS1Q8N1I8 211 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 NOP53Q9NZM5 478 aaKnown RBP9.2□□□□□ -0.94
CNOT9-206ENST00000473626 FAM8A1Q9UBU6 413 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
CNOT9-206ENST00000473626 GIPC1O14908 333 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 SORBS3O60504 671 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 GSK3AP49840 483 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 RAC1P63000 192 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 FOXD4L6Q3SYB3 417 aaPredicted RBP9.19□□□□□ -0.94
CNOT9-206ENST00000473626 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
CNOT9-206ENST00000473626 TPTE2Q6XPS3 522 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 FBXO11Q86XK2 927 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 FRMD6Q96NE9 622 aa9.19□□□□□ -0.94
CNOT9-206ENST00000473626 PIK3R2O00459 728 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 ADAM11O75078 769 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 GSTT1P30711 240 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 NLRP12P59046 1061 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 PRRT3Q5FWE3 981 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 FAM117BQ6P1L5 589 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
CNOT9-206ENST00000473626 ABCC9O60706 1549 aa9.17□□□□□ -0.94
CNOT9-206ENST00000473626 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
CNOT9-206ENST00000473626 GSTM4Q03013 218 aa9.17□□□□□ -0.94
CNOT9-206ENST00000473626 MRPL58Q14197 206 aaKnown RBP9.17□□□□□ -0.94
CNOT9-206ENST00000473626 GPN3Q9UHW5 284 aaPredicted RBP9.17□□□□□ -0.94
CNOT9-206ENST00000473626 KRBA1A5PL33 1030 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 DLL1O00548 723 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 WISP1O95388 367 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 ECEL1O95672 775 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 SELPP16109 830 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 RBM25P49756 843 aaKnown RBP9.16□□□□□ -0.94
CNOT9-206ENST00000473626 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 PTPN12Q05209 780 aaKnown RBP9.16□□□□□ -0.94
CNOT9-206ENST00000473626 C19orf57Q0VDD7 668 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 DTWD1Q8N5C7 304 aa9.16□□□□□ -0.94
CNOT9-206ENST00000473626 TTF2Q9UNY4 1162 aaKnown RBP9.16□□□□□ -0.94
CNOT9-206ENST00000473626 B3GALT4O96024 378 aa9.15□□□□□ -0.94
CNOT9-206ENST00000473626 SPATA31C1P0DKV0 1188 aa9.15□□□□□ -0.94
CNOT9-206ENST00000473626 CD68P34810 354 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-206ENST00000473626 RASSF7Q02833 373 aa9.15□□□□□ -0.94
CNOT9-206ENST00000473626 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
CNOT9-206ENST00000473626 MRRFQ96E11 262 aaKnown RBP9.15□□□□□ -0.94
CNOT9-206ENST00000473626 DCAF5Q96JK2 942 aa9.15□□□□□ -0.94
CNOT9-206ENST00000473626 KIAA1522Q9P206 1035 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-206ENST00000473626 PAGE1O75459 146 aa9.14□□□□□ -0.95
CNOT9-206ENST00000473626 CELA3AP09093 270 aa9.14□□□□□ -0.95
CNOT9-206ENST00000473626 XRCC5P13010 732 aaKnown RBP9.14□□□□□ -0.95
CNOT9-206ENST00000473626 ELNP15502 786 aa9.14□□□□□ -0.95
CNOT9-206ENST00000473626 STK35Q8TDR2 534 aa9.14□□□□□ -0.95
CNOT9-206ENST00000473626 TRIM56Q9BRZ2 755 aaKnown RBP9.14□□□□□ -0.95
CNOT9-206ENST00000473626 OSGEPQ9NPF4 335 aa9.14□□□□□ -0.95
CNOT9-206ENST00000473626 RNF225M0QZC1 329 aaPredicted RBP9.13□□□□□ -0.95
CNOT9-206ENST00000473626 ALX3O95076 343 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 CTSBP07858 339 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 ARL4DP49703 201 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 KCNMA1Q12791 1236 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 SUZ12Q15022 739 aaKnown RBP9.13□□□□□ -0.95
CNOT9-206ENST00000473626 RPS26P11Q5JNZ5 115 aaPredicted RBP9.13□□□□□ -0.95
CNOT9-206ENST00000473626 LDLRAD1Q5T700 205 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 AGGF1Q8N302 714 aaeCLIP9.13□□□□□ -0.95
CNOT9-206ENST00000473626 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 WNT8BQ93098 351 aa9.13□□□□□ -0.95
CNOT9-206ENST00000473626 ZC3H12CQ9C0D7 883 aaKnown RBP9.13□□□□□ -0.95
CNOT9-206ENST00000473626 F6X3S4 739 aa9.12□□□□□ -0.95
CNOT9-206ENST00000473626 ENC1O14682 589 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms