RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 G3V3G9 751 aa18.4■□□□□ 0.54
CDC42SE1-203ENST00000470278 HIBADHP31937 336 aaKnown RBP18.4■□□□□ 0.54
CDC42SE1-203ENST00000470278 GYG1P46976 350 aa18.4■□□□□ 0.54
CDC42SE1-203ENST00000470278 DCAF8Q5TAQ9 597 aa18.4■□□□□ 0.54
CDC42SE1-203ENST00000470278 WBP1LQ9NX94 342 aa18.4■□□□□ 0.54
CDC42SE1-203ENST00000470278 POLR2AP24928 1970 aaKnown RBP18.39■□□□□ 0.53
CDC42SE1-203ENST00000470278 CXCL9Q07325 125 aa18.39■□□□□ 0.53
CDC42SE1-203ENST00000470278 PNMA8AQ86V59 439 aaPredicted RBP18.39■□□□□ 0.53
CDC42SE1-203ENST00000470278 GJA3Q9Y6H8 435 aa18.39■□□□□ 0.53
CDC42SE1-203ENST00000470278 TIMM10P62072 90 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 TNIP1Q15025 636 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 CIAPIN1Q6FI81 312 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 VPS37DQ86XT2 251 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 TDRD7Q8NHU6 1098 aaKnown RBP18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 LRRCC1Q9C099 1032 aa18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
CDC42SE1-203ENST00000470278 TRAF5O00463 557 aa18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 NEFLP07196 543 aa18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 STRIP1Q5VSL9 837 aa18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
CDC42SE1-203ENST00000470278 USP17L3A6NCW0 530 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 USP17L4A6NCW7 530 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 SEMA3EO15041 775 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 RAD17O75943 681 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 COL1A1P02452 1464 aaPredicted RBP18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 VIL1P09327 827 aaKnown RBP18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 ADORA1P30542 326 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 BCAMP50895 628 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 CST9Q5W186 159 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 CCDC102BQ68D86 513 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 FAM205AQ6ZU69 1335 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 USP17L1Q7RTZ2 530 aa18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 DBNLQ9UJU6 430 aaKnown RBP18.36■□□□□ 0.53
CDC42SE1-203ENST00000470278 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 PSMD14O00487 310 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 RPS12P25398 132 aaKnown RBP18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 KCNQ5Q9NR82 932 aa18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
CDC42SE1-203ENST00000470278 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 APBB1O00213 710 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 PHKA1P46020 1223 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 FKBP1AP62942 108 aaKnown RBP18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 AACSQ86V21 672 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 GPRC5DQ9NZD1 345 aa18.34■□□□□ 0.53
CDC42SE1-203ENST00000470278 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.53
CDC42SE1-203ENST00000470278 IGHDP01880 384 aa18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 ARID4AP29374 1257 aaPredicted RBP18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 TTLL5Q6EMB2 1281 aa18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 AGBL3Q8NEM8 1001 aa18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 DPF2Q92785 391 aa18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
CDC42SE1-203ENST00000470278 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 LBX1P52954 281 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 GTF2IP78347 998 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 DEFB115Q30KQ5 88 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
CDC42SE1-203ENST00000470278 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 CTCFP49711 727 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 MMP14P50281 582 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 CCDC158Q5M9N0 1113 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 TBC1D22AQ8WUA7 517 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 GMLQ99445 158 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
CDC42SE1-203ENST00000470278 SALL1Q9NSC2 1324 aa18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 PGAP2Q9UHJ9 254 aa18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
CDC42SE1-203ENST00000470278 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 CERS5Q8N5B7 392 aa18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 ABT1Q9ULW3 272 aaKnown RBP18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
CDC42SE1-203ENST00000470278 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms